Cynara cardunculus var. scolymus (artichoke): 112507849
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Entry
112507849 CDS
T05604
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112507849
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112507849
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
LRR_At1g61320_AtMIF1
F-box_5
F-box
Motif
Other DBs
NCBI-GeneID:
112507849
NCBI-ProteinID:
XP_024968346
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All DBs
Position
LG 2:complement(34709049..34713825)
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AA seq
676 aa
AA seq
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MKKQKCIQEDAETQINPFDFLSEEIVFLILDCLQTNPFDRKSFSLVSKSFYSIESRHRKT
LKPFPRTTNDHHHDQLKKLLNRYPFVTHLDLSLCPRIPDSSLSYISNSCGKALKSINLSR
SNFFTHVGLSCLVSNCVNLVDIDLSNAVHLNDTAAAAIASCRSLERLCLTRCKSLTDIGI
ACIAVGCLKLRVLNLKWCLGVSDLGVALIAVKCKQIRSLDLSHLLITEKCLPLLLKLQYL
KVLVLEGCCGIGDESLVSLKQGWKSLKTLNMSYCENVSHVGLSSLTSSTTCLQNLSLAYG
PTVTLAVSESLQKLSQLQSIRLDGCHVTCSGLKGIGNSCVSLKELSLSKCSGVTDDGLSS
VVMKQTELKRLDITCCRKITQASIAHLTKSCGSLVSLKMESCTLVPSGAFVLIGQHCRFL
EELDLTDNDVDDEGLKSISRCSQLSVLKLGICLNISDEGLIFIGNGCPKLIELDLYRSVG
IKDAGISAVAHGCPSLEMINISYCGNITDSSLISLSNCSKLNTLESRGCPLITSVGLKAI
AIRCKQLTKLDIKKCFNVDDSALIPLAHSSQNLRQINLSYSSVTDVGVLCLARVGCLQSL
TILHMEGLSGSGLAVALLGCGGLTKVKLQSSFRSLVPRLVIEHVEARGCVFQWRDKVFEA
ELDPKCWKLQAQDIEF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaaaaatgtatccaggaagatgctgaaacccagatcaacccttttgatttt
ctttcagaagaaatcgttttcttaatcttagattgcctccaaacaaacccatttgatcga
aaatcattctctttggtttccaaatcattctattcaattgaatctcgtcatcgcaaaacc
ttaaagccctttcctcgtactaccaatgatcatcatcatgatcaattaaaaaagctgtta
aatcgatacccatttgtaacccacctcgatctttccctctgccctcgaatcccggatagt
agtttatcatacatatcgaattcttgcggaaaagccttgaaatccatcaatctttctagg
tctaatttctttacccatgtgggtttgtcatgtttggtttccaactgtgttaatttggtg
gatattgatctctcaaatgctgtgcatttgaatgacactgcagccgcggctattgcgagt
tgtcggagtttggagaggttgtgtttaactaggtgcaagtctttgactgatattggaatt
gcgtgtattgcagttgggtgtttaaaattgagggttttgaatttgaaatggtgtttaggt
gttagtgatttaggggtggctttgattgctgttaagtgcaagcagattagaagcttggat
ctttctcacttgctgatcacggagaaatgcttgcctttgctattgaagttgcaatatctt
aaagttttggttttagaaggatgttgtgggattggtgatgaaagtcttgtgtccctcaaa
caagggtggaagtcactgaagacgttgaatatgtcgtattgtgagaatgtttctcatgtg
ggattgtcttcactaaccagcagcaccacttgtcttcagaatcttagcttagcatacggg
ccaacggtaactcttgctgtttctgaaagtctgcaaaagctttcccaattgcaatcgatc
cggttagatggttgccatgttacatgttctggactcaagggcattggaaactcgtgtgtt
tcgctcaaggaactaagcttaagtaagtgctcgggtgtgacagatgatggtctttcatct
gttgtgatgaaacaaacagaattgaaaaggctagacatcacatgttgtagaaagataact
caagcttcgattgcccatctcacaaaatcatgtgggtccctcgtttctctcaagatggag
tcgtgtacccttgttccttcaggagcttttgttttgatagggcaacattgtcgttttctt
gaggagcttgaccttactgataatgatgtcgatgatgaaggcctaaaatcaatctcaaga
tgttcccaactctctgtcttgaagcttgggatatgcctgaatataagcgatgaggggctt
atttttattggaaatggatgcccgaaacttatagagctcgatttatacagatcagttgga
attaaagatgcgggcatttctgcagttgctcatggttgcccttcccttgaaatgatcaac
atttcttactgtggaaacatcaccgatagctccttgatctcgttgtcaaactgttcaaag
ctaaatacccttgaaagccgaggatgccctcttattacgtctgtaggactaaaagccatt
gccattagatgcaagcaactcacgaagctagacatcaagaaatgcttcaatgtagacgac
tctgcattaatcccacttgctcattcttcacaaaatctcagacagataaatttgtcgtat
agttcagtgacggatgttggagtgttatgccttgctagagtggggtgtttgcaaagcttg
acgatccttcacatggagggtttgagtggaagcggacttgcagttgcgctgttgggatgt
ggagggctgacgaaagtgaagctacaatcgtcatttagaagtttggtgccaagattggtg
atcgagcatgtagaagctcgtggttgcgtttttcaatggagagataaagtgtttgaggct
gaattggatccaaaatgttggaaactacaagcacaagacattgaattttga
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