Cynara cardunculus var. scolymus (artichoke): 112508079
Help
Entry
112508079 CDS
T05604
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112508079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112508079
03032 DNA replication proteins [BR:
ccav03032
]
112508079
Spliceosome [BR:
ccav03041
]
Complex A
U1 snRNP components
Sm proteins
112508079
U2 snRNP components
112508079
Complex B
U1 snRNP components
112508079
U4/U6.U5 tri-snRNP components
112508079
Complex C
U2 snRNP components
112508079
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112508079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
CoiA_C
Motif
Other DBs
NCBI-GeneID:
112508079
NCBI-ProteinID:
XP_024968626
LinkDB
All DBs
Position
LG 2:1201140..1205763
Genome browser
AA seq
125 aa
AA seq
DB search
MNLVRCLMKLNKELVSIELKNRIVDDGTVTGADISMNTHLKTVKLALKKKNPVSLDHLSI
RGNNIRSYIFFILKLGNLEVEKNLYANLRKDPHLHKEFSFSSYLNLEIGFTHLLKREFDV
KMAKK
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgttaggtgtttgatgaagctcaacaaggagcttgtttcgatcgagctcaag
aaccgaattgttgatgatgggaccgttacaggtgcggatattagtatgaacacacatctg
aagacggttaaacttgcactaaaaaagaagaatccagtgagtttagatcacctaagcatc
aggggcaacaatattcgatcgtatatattcttcattctgaaattgggtaatcttgaggtt
gaaaaaaatctttatgcaaatttgcgtaaggatcctcatttgcataaagaattttcgttt
tcctcttatttaaatttagaaataggctttacgcatttgctaaaacgggaattcgatgtc
aaaatggctaaaaagtga
DBGET
integrated database retrieval system
