Cynara cardunculus var. scolymus (artichoke): 112508082
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Entry
112508082 CDS
T05604
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112508082
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
112508082
Transfer RNA biogenesis [BR:
ccav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
112508082
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
112508082
NCBI-ProteinID:
XP_024968629
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Position
LG 2:4253529..4272858
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AA seq
795 aa
AA seq
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MVVRTVNSVSLFRSTSPPSPLPLAAFHTYRQIRAFQYLQLSRLSICKPMVFGYYNLKSGG
SRSYSVQSFVDSVMEEFEALRRRRTVRASNKSVLTSNKELVEDKLRKQVLQKGLLLEFKK
DSERILLAVAQKPDGRKNWIVSDQNGVTTSIKPQQITYIVPGIDNFDTTNILDFNQRAQN
SLDPTLLEFAWTELLEMNKSVTVEELAEMIFGSAEPVESYCAHLLLSRDEIYFTVLDSKG
SCSVYGPRPTVQVEELRRRMLAKEAADKEFHEFVELLKSAKAMPPRGKPSKCSWKVEEKI
WHRIESLEAFAIDACKDEQTNIAGAILKGMGLPKTPTSAVNLLIDIGYFPVHVNLDLLKF
SIRTNYPDKILSAAERLLLESPDTDKDDRIDLTHLKVYAIDVDEADELDDALSATKLHDG
RIKVWIHVADPSSFVQPGSMIDREAMQRGTSVFLPTATYPMFPEKLAMEGMSLRQGTNCR
AVTVSVVLHSDGSIAEYAVNNSTIRPTYMLTYESASELLHLNLEEELELRTLSEAASLRL
QWRRGQGAIDTGSLETRIKVENPDDPEPSIRLYVEDQRDPAMRLVSEMMILCGEALATYG
SANKIPLPYRGQPQSNIDTSAFDHLPEGPVRNSAIVKIMRAAEMDYRKAIRHGILGIPGY
VQFTSPIRRYMDLLAHYQVKAFLRGDALPFTAGQLEGMAASVNMNARIAKKLFSSSLRYW
ILEYLRTQPKQRKYRALILKFIKDRNASLLLLEVGFQASAWVSIGSHVGDEVEVRVEEAH
PRDDILTLKEVVQVT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggtggtccgaacggtgaattcagtttcactttttcgctcaacctcgccgccgtcgccc
ctgccactagcagcgttccacacgtaccgccaaattcgagcttttcagtatctacagttg
tctcgtctttcaatttgtaagccgatggtgttcggttattataacttaaaaagcggtggc
agtcggagttattccgtccaaagttttgttgattccgtgatggaagagtttgaagcatta
cgtcggcggaggacagttcgtgctagtaataaatcagtattgacaagcaataaggagctt
gttgaagataaattgcggaagcaagtactgcagaaagggttgctgctagaatttaagaaa
gattctgaaaggatattgcttgctgtagctcagaaacctgatggaaggaagaattggata
gtctccgatcagaatggtgttacaacttccattaaaccacaacagatcacttatatagtt
ccagggattgataatttcgacaccacaaacatattggacttcaatcagagagctcagaat
agcttggatcccacactccttgaatttgcttggactgagcttcttgaaatgaacaagtcg
gtaacagttgaagaattggctgagatgatttttggcagtgctgaacctgttgagagctat
tgcgcccatctcttgctatcgagagatgaaatttacttcactgtgcttgacagcaaaggc
tcttgttctgtttatggtcctcggccaactgttcaggttgaagaacttagacgtagaatg
cttgcaaaggaggcagccgataaggaatttcacgagtttgtggagttactaaaatctgca
aaagcaatgcctccacgtggaaaaccgtccaaatgttcctggaaagttgaagagaaaatc
tggcacagaatcgagtctcttgaggcttttgctatagatgcttgtaaagatgagcaaacg
aatattgcaggagcgatcctgaagggaatgggcttaccaaagacgcctacttctgcagta
aatctcctcatagatattgggtatttcccagtacatgtcaatcttgatctcctaaagttc
agcatacgtaccaattatccagataagattttgtcagctgctgaaaggcttctgcttgaa
tcacccgatacagataaggacgacaggatagatctgacacatctgaaggtatatgcaatt
gacgtggatgaagcagatgagcttgatgatgcactaagtgcgacaaagttgcatgatggc
cgtattaaagtttggatacatgttgctgatccatctagctttgttcagcctgggagcatg
atagacagagaagcaatgcaaagaggaacatctgtttttttaccaactgccacctatcca
atgtttcctgagaaacttgccatggagggaatgagcttgaggcaaggaacaaattgcagg
gctgttacagtatcagttgtattgcactctgatggcagcattgcagaatatgcagtgaat
aattcaaccattagaccgacgtatatgctaacatatgagagtgcatctgagctgcttcat
ctgaatctggaagaagagttggaactaaggactctttctgaggctgcaagtcttcggctt
cagtggcgacgtggacagggtgcaattgacacaggctcgctggaaactagaataaaggtg
gaaaatccagatgatccagaaccatcaattaggttgtatgttgaagaccagagagatcct
gcaatgcgactcgtttccgaaatgatgatactttgtggggaagctctagccacatatggt
tctgctaataagattcctttaccatacagaggacagccccaatccaacattgatacatct
gcatttgatcatcttccagaaggcccagttcgtaactctgctattgtgaaaattatgcgt
gctgctgaaatggattatagaaaggctatacgccatggtattctgggtattcctggttat
gtgcagtttacatctcctattcgcagatatatggacctccttgctcattaccaggtgaaa
gcctttcttagaggcgatgctcttccatttacagctgggcaactagaagggatggctgca
tctgtgaacatgaatgctaggatagcaaagaagctatttagcagcagcctacggtattgg
atactagaatacttgagaacacaacccaaacaaagaaaataccgtgcgctgatccttaaa
ttcatcaaagatcggaatgcatctttactacttttggaggttgggtttcaggcgtcggct
tgggtgtcgatagggtcacatgtcggggatgaagtggaggttcgggttgaagaagctcat
ccgcgtgatgacatccttacgctcaaagaagttgtacaagtgacatga
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