Cynara cardunculus var. scolymus (artichoke): 112508105
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Entry
112508105 CDS
T05604
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112508105
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
112508105
NCBI-ProteinID:
XP_024968657
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Position
LG 2:677443..681721
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AA seq
597 aa
AA seq
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MDGKKLEYKGKEALKGIQKLTAEAEKVQEDLLKAILTRNKKTEYLQKHMKGLSTDDVLEF
KQKVPVITYKDIYPYIQRIANGEDSSLISGHHITEMLCSSGTSGGEPKLMPSIAEDLDRR
TFVYNLIMPIMNQYVTGLDEGKAMLLYFVKAEMSTPCGLPARTVLTSYYKSKHFKCRSSD
PYNDHTSPNEAILCDDSNQSMYCQLLAGLINRHHVLRLGAVFASALLRAISFLERNWLSL
CSDIRTGQLNPMITDSGCRSAMSTMLKLADPHLADEIENICSRRSWKGIVCDLWPKAKYI
EAVVTGSMSQYIPALEYYSRGKLPLVCTMYASSECYFGVNLKPLCDPANVAFTLLPNMAY
YEFIPLDENETYGNDDEEIPSDKLVELVLVKVGCYYELVVTTFSGLNRYRIGDVLQVTGF
HNQTPQFRFICRRNVILSIDNDKTNEEDLHKSIMAAKRLLEPYNALLVEYTSYADTSSVP
GHYVIYWEIKHCTPSVLDKVSSPLGPKVLQDCCIAMEEDLDYIYRRCRTNDKSIGPLEIR
VVKPGTFESLMDLFIKQGASINQYKTPRCIKSDAALKLLNSSVKAYFFSPRDPTWNP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagaaactggaatacaaaggaaaggaggctctgaaggggattcagaagcta
acagcagaagctgaaaaagttcaagaagatttgctgaaagcaatcttaacaaggaacaaa
aagacggaatacctccaaaagcacatgaaaggattgtcaacggatgatgtattggagttc
aagcagaaagtaccagtcatcacatacaaagacatctatccctatatccaaaggatagct
aatggtgaagactcctctttgatctctggtcaccacataaccgagatgctatgcagctca
gggacatctggtggagagcctaagctaatgccatccattgcagaagatcttgaccgtcga
acttttgtctataacttgatcatgcctataatgaatcagtacgtgacaggacttgatgaa
ggtaaggccatgcttctatatttcgtcaaggcagagatgtccactccttgtggtttacca
gctcggacagttctaaccagttattacaagagcaagcattttaagtgccgatcgagtgat
ccttacaacgatcacacaagcccgaatgaagccattttgtgtgatgacagcaaccaaagc
atgtattgccagctgctagcagggttaatcaaccgccaccatgtcctgcgtcttggagcc
gtatttgcatcagctttgctgcgcgcaatctccttccttgaacgcaattggcttagtcta
tgcagcgacatccgcacaggccaactgaaccctatgattactgattctggctgccgatca
gccatgtctaccatgctcaaattggcagaccctcatctagcggatgagatagagaacatc
tgtagccgtcgatcatggaaaggaatagtctgtgacttatggcctaaggccaagtatatt
gaggcagtggttacagggtctatgtcccaatacataccagctcttgagtactatagtagg
gggaagttaccacttgtatgtacaatgtatgcttcatccgaatgttattttggggtaaat
ttaaagccattgtgtgatcctgcaaatgttgcatttaccctcttaccaaacatggcttac
tacgaattcatacccttggatgaaaatgagacatatggcaatgacgacgaagagatcccg
tcggataagcttgttgagctggtgctagttaaagttggttgctactacgaattggtggtc
acgacattttctgggctaaaccggtatcgtattggagatgtgctccaagtaactggattt
cataaccaaaccccacaatttaggttcatctgcaggaggaatgtcattctaagcattgac
aatgacaaaactaatgaagaagatctgcataagagcatcatggcagcaaaaaggctttta
gaaccctacaatgcactgcttgtggaatacactagctatgctgatacatcatcagtgcca
ggacactacgttatatactgggagatcaaacattgcacaccctcagtcctagacaaggtc
agctctccacttggccctaaggtgcttcaagattgttgtattgcaatggaggaagatctt
gattacatttacaggcgatgtcgcactaatgacaagtctattggaccacttgagattcgc
gttgtgaagccaggcactttcgagtccttgatggacttgtttataaaacaaggtgcatcc
attaatcagtataaaactccacggtgtattaagtctgatgctgcactaaaattgctcaac
tctagcgtgaaggcctacttctttagtccccgagatcccacatggaatccttga
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