Cynara cardunculus var. scolymus (artichoke): 112508152
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Entry
112508152 CDS
T05604
Name
(RefSeq) protein indeterminate-domain 12
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112508152
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112508152
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
DUF7128
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
112508152
NCBI-ProteinID:
XP_024968698
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All DBs
Position
LG 2:complement(13437190..13441286)
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AA seq
479 aa
AA seq
DB search
MMFSASVYSTTSNKNSTSLSEEAATSTVSSVITSKIPHEFTPSMTLSSISNLAHQEHDLY
PNHQKIKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNL
PWKLKQRNNKDEMKKRAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSK
IYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEETARLSAAAAAAAA
AVSITNNHHPSITNNVTQTPFNIQQNIQNPSSSLFPFTPTLNATWVPTQTLNPTRIKPET
IHHQHLLPAITTPFYQEPNKEQLRMITSPPATTFHGLHVSTSRDHVPAAHHLSATALLQK
AATVGAVGDHVGSTMSRLDMGELVQVTTTAAVISPEYHQHMGLTSGNIATWQKTDRLTRD
FLGLTGDQEDDHHHHGGGADVNVSVNMRNMLTYTGGIEIPTHGFGFAEPTTASEAWGNC
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttcagcctcagtttattctactactagtaataaaaactcaacctctttatct
gaagaagctgcaaccagcactgtttcttcagtaattacaagtaagattcctcatgaattc
actccatcaatgaccctttcttcaatttcaaatcttgctcatcaagaacatgatctctac
cctaatcatcagaagatcaagaaaaagagaaacctcccaggaaatccagacccagatgca
gaagtgatagcattatcaccaaagacactgatggcaacaaacagattcgtgtgtgagatc
tgcaacaaagggtttcaaagagatcagaacctgcaacttcacagaagaggtcataacctg
ccatggaagctgaagcaaaggaacaacaaggatgagatgaagaaaagggcttatgtatgc
cctgagccaagttgtgtgcaccaccacccttctagggctcttggggatctcactgggatc
aagaaacacttttgtagaaaacatggtgaaaagaagtggaagtgtgacaagtgttctaag
atctatgctgttcaatctgactggaaagctcattctaaaacttgtggcactagagagtat
agatgtgattgtggtaccctcttctcaaggaaagatagcttcattactcacagagctttc
tgtgacgccttggctgaagaaactgccaggctctcagctgcagctgcagctgcagccgct
gcagtatcaataacaaacaaccaccacccttcaattaccaacaatgttacacaaaccccc
ttcaacattcaacaaaatattcaaaacccctcctcgtctctttttcctttcactcccacc
ctaaacgctacttgggtccccacccaaacccttaacccgacccgaatcaaacccgaaacc
atccaccaccagcatctccttccggcgattacgacgccgttttaccaagaacccaataag
gaacaactgaggatgataacttcaccgccggcgaccacattccatggcctccacgtcagc
accagccgagatcatgttccggcggcccaccacctctctgccaccgcactcctccagaag
gctgcgacggtgggtgcggtgggtgatcacgtggggtccacaatgagtcggttggatatg
ggggagttggttcaggtgacgacgacagccgccgtgatctcgccggaataccaccaacac
atgggtctgacttctgggaatatcgccacgtggcagaaaacggaccgtttgaccagggat
tttcttgggttgaccggagatcaagaggatgaccaccaccatcatggcggtggtgctgac
gttaacgttagcgtgaacatgaggaatatgctaacgtacacggggggtatagagattcca
acccatgggttcggttttgccgagcctacaactgcctccgaagcatggggcaattgttga
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