Cynara cardunculus var. scolymus (artichoke): 112508507
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Entry
112508507 CDS
T05604
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112508507
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
112508507
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
112508507
Prokaryotic type
112508507
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
112508507
NCBI-ProteinID:
XP_024968911
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All DBs
Position
LG 3:32718026..32722725
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AA seq
295 aa
AA seq
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METKKKKGLVIEGYPIEGLSIAGHETCVILPSLNLAFDIGKCPQRAISQQFLFISHGHMD
HIVFLIHVFSKSSLKGGLPMYVATRGLYRMAPPTIIVPTIIKESVEKIFEAHRTMDQSEL
KHTLIGLDVGEEFYLRKDLKVKAFKTYHVIPSQGYVIYSVKQKLKPQYVGLPGDEIKKLK
FSGVEITYTTTSPEVAFTGDTTSDFIVDTNNADVLKAKILIMESTYVENTMTVENARDYG
HTHLSEIINYSSRFENKAILLIHFSARYQLDVIQEALSALHPPLAGRVFALTEGF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaagaagaaaaagggtttggttattgaagggtacccgattgaaggtttgtcg
atagcagggcatgagacttgtgtgattctcccctctctcaacttggctttcgacattgga
aagtgccctcaacgagccatctctcaacaattcctcttcatatctcatggtcacatggat
cacattgttttcctgattcatgtgttttcaaagtcttctttaaagggaggattgcctatg
tatgttgcaactcgtggtttatacagaatggctccaccaactattattgtaccaacaatc
attaaagaaagtgttgaaaagatatttgaagcacaccggacaatggaccaatcagagctg
aagcatactttgattggattggatgttggggaagaattctacttgagaaaagatttgaaa
gtaaaagcatttaagacatatcatgtcataccaagtcagggttatgtaatttattctgtg
aaacagaagcttaagccccagtatgtcggtttgccaggggacgaaatcaagaagttgaag
ttctcaggtgtggagataacgtacacgacaacatcacctgaagtagcttttactggagac
actacatctgacttcattgttgatacgaataatgctgatgtattgaaggcaaagattctc
attatggagagcacgtacgtggagaatacaatgacagtggagaatgcaagagactacgga
cacacacatttgtccgagataatcaattattcaagcagatttgagaataaagcaattctg
ttgatccacttttcagctcggtatcagttggatgtgattcaagaagccctttctgcactg
cacccacctttggcaggccgtgttttcgcactaacagaaggcttctag
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