Cynara cardunculus var. scolymus (artichoke): 112508511
Help
Entry
112508511 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 11
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112508511
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112508511
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112508511
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112508511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
112508511
NCBI-ProteinID:
XP_024968919
LinkDB
All DBs
Position
LG 3:31926012..31933373
Genome browser
AA seq
537 aa
AA seq
DB search
MRRRAADYRRPVRRRLSVWIWVLLGLFCIAGFILLVVLQNQEYEDRVEQPVLERNAGTVQ
FTHRTLNVTEEIANDANSYARQLLEQMTLAKAYIVIAKDHNNLHLAWELSSKIRSCQFLL
SKAAMREDPMTQDEAEPLIRSLSTLIFKAQDAHYDIATTIMTMKSHIQALEERTNAATVQ
STFFGQLAAEALPKNLHCVNVKLLADWLIKKTLQEVTDEIKSSPRLLDNNLYHFCLFSDN
LMAVSAVVNSTVSNTDHPKQLVFHIVTNEANYGAMQAWFVSNDFKGSIVEVQKVEDLTWL
NASYSPVVRKLTEADLRAYYFEGSQELNDEPKFGNPKYVSLLNHLRFYIPEIYPQLEKVV
FLDDDVIIQKDLTPLFSLDLHGNVNGAVETCLEAFHRFYKYLNFSNPVLSSKFDPQACGW
AFGLNVFDLVAWRKANVTATYHYWQEQNDDGSLWKLGTLPPGLLAFYGQTEPLDRRWHVL
GLGYDVNIDNRLIESAAVIHFNGNLKPWLKFGIGRYKPLWERYVNQTHPYLLDCVTN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcgggctgcggactaccggcgccccgttcgaaggaggctttcagtttggatc
tgggtccttctcggtttattctgtattgctggatttattctcttagttgttctacagaat
caagaatatgaagatcgggtggaacagcctgtattggagagaaatgctggaactgtacaa
tttactcataggacgttaaatgtaaccgaggagatagcaaatgacgccaattcgtatgcc
agacaattactagagcaaatgacacttgcaaaagcgtatatagtcattgcaaaagaccac
aacaaccttcatcttgcttgggagttgagttcaaagatcagaagctgtcagtttctgctt
tcgaaagccgccatgagagaagacccaatgacacaagatgaagccgaaccactcattaga
agtctttcaactctcattttcaaagcgcaagatgcccattacgacattgcaacaacaatc
atgaccatgaaatctcacatccaagctcttgaagagcgtacaaatgcagccactgtccaa
agtacattcttcggacagttagcagccgaagcactgcccaagaatcttcactgtgttaat
gtaaagcttttggctgattggctcataaagaagacactccaggaggttacagatgagatc
aagagctccccaagattacttgacaataatctttatcatttctgcttattttcagataat
ctgatggcggtttcagccgtcgtcaactccacagtctcaaacaccgaccacccaaagcag
cttgtgttccacatagttacaaatgaggccaactatggagccatgcaagcttggtttgtt
agcaacgactttaaagggtcgatagtcgaagtgcaaaaagttgaagacttgacttggtta
aacgcatcttactcgcctgttgttagaaaactaacagaagccgacttgcgtgcatactat
ttcgaagggtctcaagaacttaacgacgagccaaagtttgggaacccaaagtatgtatct
ttattgaaccatcttcggttctacatccctgagatctaccctcagcttgaaaaggtcgtc
tttcttgacgatgatgtcatcatccagaaagatttgactcctcttttctcattggatctt
catggaaacgtaaacggagcagttgaaacctgtcttgaagctttccatcgattttataag
tatctaaacttctctaatccagtcctgagctccaagtttgacccgcaggcatgtgggtgg
gcgtttggtctgaacgtcttcgatcttgtggcatggagaaaggctaacgtgacagccacg
taccattactggcaagaacagaacgatgatggaagcttatggaagttaggaaccctgcca
cccggtctattggctttctatgggcagactgagccactggaccggagatggcatgtgtta
gggttgggttatgatgtgaacatcgataacaggctcatagagagtgcagctgtgattcat
ttcaacgggaacctgaagccgtggctgaagtttgggatcggcaggtacaagccgttatgg
gaacggtatgtgaaccaaacgcacccctatcttcttgattgcgttacgaattga
DBGET
integrated database retrieval system
