Cynara cardunculus var. scolymus (artichoke): 112508652
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Entry
112508652 CDS
T05604
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112508652
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112508652
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
112508652
NCBI-ProteinID:
XP_024969098
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Position
LG 3:15735591..15753096
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AA seq
683 aa
AA seq
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MSSQLTPSKRPHEQSDSEPNGKGKLQKPAYFTSQNTSFKITPGSIVFRVLCAASKTGSVI
GKGGNKISQIRLDTGAKVRVEETVPGCNERVVVIAGSGIEIGISTDQSKDADEETKETQA
TEETNDAEKPDGDSTQKQSVAGEDLQSEKVASSVQKALLLVFERMVEGEQEEPEMNGGDA
DPKKENTTIVVRLLVLSTQVGCLLGKSGGVIKQMASESGAQIRILPRDKLPLCASSSDEL
VQISGEVNAVRKALQSVSQQLLDHPPRENDSFSANNSGSSHSFGGSFSRQDSHPPFPSHG
GPLPAGPRDGGSGTFGRFGSLQDMLTYRLICPDEKVGGVIGKGGTIVKALKHETGCDIKV
LERTAESDDRVIVISGPAHPDERICAPQDAVLRVQTRIYRAAPENKAVTAKIIVSAHQIG
CLLGKGGAVISEMRKTTGAYIRILGKDQTPQYAAENEEVVQVNGDFDAVHEALLQITTRL
RNHFFRDAFPSMNHPSNPGFPDHGPPFPSYMGRREHSPPGRYSSFNRFDAGPPPHGAFHP
HDDCPPFMNDRPGFPHPMSERSSAPWGPQVIEGRGGFGGPLGFSDYGGVPQRRMGGFGGG
SHQAIITNTTVEVVVPRTVVPSIYGEDGGCLKQIREISDAKITITDPKPGAKETLIIISG
TPEQAHAAQSLIQAFVISESEGS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaattaacgccgtccaagaggccacatgagcagagtgattcagagcccaat
ggaaaagggaagttgcagaaaccggcttattttacttcccaaaatacatcatttaaaatt
actccaggaagcattgtttttcgagtgctttgtgctgcttctaaaactggaagtgttatt
ggaaaagggggtaacaaaatatcacagatacgcctggatactggtgcaaaggtgagggtt
gaggaaaccgttcctgggtgcaatgagagagtagttgttatcgcaggatctgggattgag
attggaatttctactgatcagagcaaggatgcagatgaagaaactaaagaaactcaagca
actgaagagaccaatgatgcagaaaaacctgatggggatagtacacaaaaacagtctgtt
gcaggggaagatttgcaatccgaaaaggttgcttcttctgtgcagaaggctctgttgctt
gtgtttgaaagaatggttgaaggagaacaagaagaaccagagatgaatggaggggatgca
gatcctaaaaaagagaacacaaccattgttgtgaggttactcgtactttctactcaagtt
ggctgccttttgggaaaatctggtggcgtaatcaaacaaatggcctctgaaagtggggca
cagatacggattcttcctagggataaacttcccttgtgtgcatcttcttccgatgaattg
gttcagatatctggagaagtaaacgcagttaggaaagcacttcaatctgtttcacagcag
cttctagatcatccacctcgagagaatgattctttctctgccaacaatagcggttcatct
cattcctttggtggttctttttctcggcaagactcacatcctccttttccttctcatgga
ggaccattacctgcagggcctcgtgatggtggaagtggtacttttgggcgttttggttct
ctccaagacatgctaacctaccgtttgatatgccctgatgagaaggtggggggtgtaatt
ggaaaagggggaactattgtgaaggcacttaagcacgagaccggatgtgacattaaagtc
cttgaaagaactgcagaatcagatgaccgtgttattgtcatatctggaccagcgcaccca
gatgagaggatatgtgctccccaagatgcagttcttcgtgtacaaacaaggatatatcgg
gctgcacctgagaacaaggcagtgacagcaaaaatcatagtgtctgcacatcaaattgga
tgtctccttggcaagggtggtgcagttatatctgaaatgagaaagacaactggggcttat
attcgtatattaggaaaggatcaaactccacagtatgctgctgaaaatgaagaagtagtt
caggtaaatggtgactttgatgcagtccatgaggctcttttgcaaataaccacaagactg
cgaaatcatttttttcgagatgcatttccttctatgaatcatccatcaaatcctggtttc
ccagatcatggtccaccatttccatcatacatgggtaggagggagcattcaccaccagga
aggtactcctcttttaaccggtttgatgctggtccccctccacatggtgcgtttcacccg
catgatgattgccctccatttatgaatgatcgaccaggctttccccaccctatgtctgaa
agatcttcagcaccatggggtcctcaggttattgaaggtcgtggtgggtttggtggacct
ctaggcttttctgactatggaggagtcccccaaaggagaatgggtggatttggaggagga
agccaccaagctataatcacaaataccactgtggaagttgttgttcctcgtactgttgta
ccttctatatatggagaggatggtggatgtctaaaacaaattcgtgagatctctgatgcg
aaaatcaccataaccgacccgaaacctggagcaaaagaaactttgatcataatatccggc
acacctgagcaggctcatgctgcacagtcccttattcaagcttttgtgattagcgagagt
gaaggttcttga
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