Cynara cardunculus var. scolymus (artichoke): 112508655
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Entry
112508655 CDS
T05604
Name
(RefSeq) ABC transporter G family member 36-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112508655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112508655
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112508655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
AAA_16
AAA
AAA_28
AAA_33
ABC2_membrane_3
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
112508655
NCBI-ProteinID:
XP_024969106
LinkDB
All DBs
Position
LG 3:38568977..38576836
Genome browser
AA seq
1504 aa
AA seq
DB search
MEEKRSVSIGTSIGRSLSRAAGSWKMEDVFSRGAGGGGSHDGRNSRHSVEDEEALRWAAL
EKLPTYNRIRTTIFKSYVPADLQNQTPADKMLLDVRELDPNARQDFIDKIFRVAEEDNER
FLKKFRQRVNKVGISLPTVEVRFQNLTIEADCYVGDRALPSLPNAARNYAESLLGSLGIS
LAKKTKLTILKDASGIIKPSRMALLLGPPSSGKTTLLLAMAGKLDPNLKVEGEITYNGHK
LNEFVPRRTSAYISQNDIHVGEMTVKETLDFSARCQGVGSRLEMLSELAKREKQAGIFPE
AEVDLFMKATAIEGDASSLITYYTLRILGLDVCRDTFVGDAMRRGISGGQKKRVTTGEML
VGPAKTLFMDEISTGLDSSTTFQIVKCLQQVVHLTESTILMSLLQPAPETFDLFDDIILL
AEGQIVYQGPRENVLEFFEGCGFKCPERKGTADFLQEVTSKKDQEQYWADRNSPYRYTTV
SEFAQRFKRFHVGERLTNELSVPFDKSQSHKAALVFKEFLVSKRELLKASWDKEWLLIKR
NGFVYVFKTVQIVTVAFIGMTLYFRTTMKTRNEEDAQIYMGALLLSLLINMFNGLAELSL
TIIRLPVVYKQRDLLFHPPWAYTIPTFLLRVPISILESITWVAILYYGIDLAPEASRFFK
HLLLVFLIQNVAAGIFRLIAGVCRTMNIANTGGSLVLLLIFLLAGFILPKTQIPNWWEWA
HWVSPLSYGFKAFAINEFYAPRWMNRLSSDNVTPLGTSVLESLDIPTQTSWYWIGAAALL
GFAVLFNVLFTLALMYFDAPGKPQAVISKEAAEEMENQQDSNQQPRLKTIASKQGRIPRS
LLFPMEEVQERKTGFRNLAIYMIFVGQNMEMQHVGSRSDSYDNSNGVAAKKGMVLPFTPL
AMSFDNMNYYVDMPSEMREQGVTENRLQLLRDVTGAFRPGVLTALMGVSGAGKTTLMDVL
AGRKTGGYIEGDIRISGFPKKQETFARISGYCEQTDIHSPNITVHESLIYSAFLRLPKEV
SKEEKMTFVVEVMELIELDNLKDAIVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP
TSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYAGPLG
RNSQQIVDYFEEISGVPEIPEKYNPATWMLEVSSGAAEIRLGIDFAEQYKSSSLFQRNKA
LVAELSTPPSGATDLHFGTRYSQSSWGQFKSCIWKMWWGYWRNPDYNLVRNFFTLAAALM
VGTVFWKIGEKRGSSGDLNTIIGAMYSAVFFVGINNCQTVQPVVATERTVFYREKAAGMY
SALPYAMAQVFVEIPYVFVQTVYYTLIVYAMVSFEWTAAKFFWFFFINFFSFLYFTYYGM
MTVSITPNEQIAAIFAASFYSLFNIFSGFFIPRPKIPGWWVWYYWICPMAWTVYGCIISQ
YHDITNTITVPGMAVDPPMNEFIVDRYGFQLDFMGPVAAVLIGFSILFAFLYAFCLRTLN
FQMR
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagagatctgtaagcattggaacaagtataggtagaagtttgagtagggca
gctgggagttggaagatggaagatgtgttttcgagaggtgccggcggtggcggtagccac
gacgggagaaacagccggcattcggtggaagatgaagaggcgttacgatgggctgctttg
gagaaacttccgacttataatcgaatacgaaccaccatttttaaatcttatgttccagct
gatcttcaaaaccaaacaccggctgataagatgttgttggatgttcgagaactcgacccc
aatgctcgacaggacttcattgataagatctttagagttgctgaagaagataatgaaagg
ttcttgaagaagttcagacaacgtgttaataaggtaggaatctctcttccaaccgtagaa
gttcggtttcaaaatttgacgatagaagcagattgctacgtgggtgatagagcacttcca
tcattaccaaatgcagcaagaaactatgcagaatcacttctgggttcgttaggtatcagt
ttggccaagaaaactaaactcaccattcttaaagatgcatctggaatcatcaaaccatcg
agaatggcacttctattgggtccgccatcttctgggaagacgacacttttgttggcaatg
gcaggaaagctcgatcccaacttaaaggttgaaggagagattacttacaacggtcataaa
ctcaacgaatttgtacctcgaagaacatcagcgtacatcagccagaacgatattcatgtt
ggagaaatgaccgttaaagaaaccttagatttctcagcaagatgccaaggagtcggctca
agattagaaatgctatcggagttagcaaaacgagagaagcaagcagggattttcccagaa
gccgaagtcgatcttttcatgaaggcaactgccattgaaggagatgccagcagtttgatc
acttactacactcttagaatattgggactcgatgtctgccgtgacacctttgttggcgat
gcaatgaggcgaggaatttctggtggacaaaagaagcgtgtaaccaccggagagatgctt
gttggaccagcgaaaactctgtttatggacgagatatcaactggtctagacagttcaact
acgtttcagatagtgaaatgcttgcagcaagttgtacacttgactgaatcgacaatcttg
atgtcgttactacagcctgctccagagacgtttgatctcttcgatgacatcattctacta
gcggaaggccaaatcgtttatcaaggaccacgagaaaatgtgctcgagttcttcgaaggt
tgtggattcaagtgtcctgaaagaaaaggcacagctgatttcttgcaagaggttacatct
aaaaaggatcaagagcaatattgggcagatagaaacagtccctatagatacaccacagtc
agtgaatttgctcagcgattcaagcgttttcacgtgggcgagaggctaacgaacgagctt
tcagtcccattcgacaagagccaaagccacaaagcagctctcgtcttcaaggaattcttg
gtctcgaaacgggagctcttgaaggcttcatgggataaagaatggctactgataaaaaga
aacggtttcgtgtatgttttcaagaccgtgcagatcgtgactgtagcatttatcgggatg
acgttatactttcgaactacaatgaagactagaaatgaagaagatgctcaaatctatatg
ggggcacttttgctaagtttacttataaacatgtttaatggtctggctgagctttccctc
actataataagacttcctgtagtttacaagcaaagagaccttctattccatccaccgtgg
gcttacacgattccgacgttcttgcttcgtgtaccgatatcaatcctcgagagtattaca
tgggtggccatactatattacggtatcgatctagccccagaagctagcaggttcttcaaa
catcttctgttggtttttctgatccagaacgttgcagcgggaatttttaggcttatcgcc
ggagtttgtaggacgatgaacatagccaacacgggtggatctctcgtccttctgctgata
tttcttttggccggtttcattcttcctaaaactcagattcctaactggtgggaatgggct
cattgggtatcaccattgtcttatggcttcaaagcctttgcaatcaacgagttctacgct
cctagatggatgaacagattgagttccgataatgttactcccttgggcacgtcagtacta
gagagcctggatatcccgactcaaacaagctggtactggatcggtgctgctgctcttcta
ggtttcgcggttctcttcaacgtccttttcactttggctctcatgtattttgatgcccca
ggaaaaccacaagcagtgatctccaaagaagcagctgaagaaatggaaaaccaacaggat
agcaaccaacaaccaagactcaaaacaattgcatccaagcaaggtagaattcctagatcc
ttattatttccgatggaagaagttcaagaacgaaaaaccggttttcgaaacttagcaatt
tacatgatttttgtaggtcaaaatatggaaatgcagcatgtaggaagtcggtccgactct
tatgataattctaatggtgttgctgctaagaagggaatggttcttccgtttactccactc
gctatgtcattcgacaacatgaactattatgtcgacatgcctagtgaaatgagagaacaa
ggggtgacggaaaacagattgcaattgcttcgtgatgtaactggcgctttcaggccggga
gttctaacggcattgatgggagtcagcggagctggaaaaacgacgctaatggatgtttta
gccggaagaaagacaggcggttatatcgaaggagacatcagaatctcgggattcccaaag
aaacaagaaacttttgctagaatttcgggatattgtgagcaaaccgatatccattctccc
aacatcaccgttcacgaatctttgatttactcggccttcctccgcctcccaaaagaagtc
agcaaggaagaaaagatgacgttcgtggttgaagtaatggagctaattgaactagacaac
ctcaaggatgcaatcgtaggacttccaggagttagcggtttgtcaaccgaacagagaaag
aggctaacgattgcagtcgagctcgttgctaacccttcaatcatcttcatggatgaaccg
acttctgggcttgatgcaagagctgcagccatcgttatgagggccgttagaaacactgtg
gacacaggaagaaccgtcgtctgcaccattcatcagcccagtatcgatatctttgaatcc
tttgatgagctgttgttgatgaaaagaggaggacaagtgatctatgcaggaccattaggc
agaaattcacaacaaattgttgactattttgaggaaatttctggggttccagagattcca
gaaaaatacaatccagccacatggatgttagaggtcagttcaggtgctgccgagatccgg
ctcgggatcgattttgcggagcagtacaagtcatcatcgttgtttcagaggaacaaggct
ttagtagcggagttaagcacgccaccttcaggagcgaccgatcttcattttggaacacga
tattctcaatcttcatggggacaattcaagtcttgtatatggaagatgtggtggggttac
tggagaaatcccgattacaaccttgttcgaaacttcttcaccttggctgcggcactcatg
gttggaacagtcttttggaaaatcggagaaaagagaggtagcagcggagatctgaacaca
atcatcggtgccatgtactctgctgttttctttgttggaatcaacaattgccagaccgta
cagcccgtagtcgccacagaaagaacagtcttttatcgagaaaaagcagccggaatgtac
tcagcgttaccatatgccatggcacaggtgttcgtggagataccatatgtatttgttcaa
accgtatattacactctgatcgtgtacgccatggtctcgttcgaatggacagcagccaaa
ttcttttggttcttcttcatcaacttcttctcgttcctttacttcacatactacggaatg
atgaccgtttccatcacaccaaacgagcaaatcgcagccatttttgcagcttctttctac
tcactcttcaatatcttttccggtttcttcattccccgacccaaaattcccggatggtgg
gtgtggtactattggatctgcccgatggcgtggaccgtatatggatgcatcatttcgcag
taccacgacattacgaacacgatcacggtgcctggaatggcggttgatccaccaatgaat
gaatttatcgtcgatcgttatggttttcagttggatttcatgggtccggtcgctgcggtt
ctaatcgggtttagcatattgtttgcattcctctatgctttctgcttaaggacattaaac
ttccagatgagataa
DBGET
integrated database retrieval system
