Cynara cardunculus var. scolymus (artichoke): 112508658
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Entry
112508658 CDS
T05604
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 59
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00040
Pentose and glucuronate interconversions
ccav01100
Metabolic pathways
Module
ccav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112508658
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
112508658
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Motif
Pfam:
Pectinesterase
PMEI
Ion_trans
SHPRH_helical-1st
NPV_P10
Motif
Other DBs
NCBI-GeneID:
112508658
NCBI-ProteinID:
XP_024969114
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Position
LG 3:complement(4894859..4903573)
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AA seq
728 aa
AA seq
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MFKFTISLLLKLSVFCLIATNPVSALTENICESASNPEACKKAIERLKKDKEVDPNNTIR
KVINFGLQRGLILMANMTHWVRHRNLRANEHAAVKGCLDAIDDGVDDLRKTLKEVDELED
AQKIQNMQDFMFHTHNIKTWLQTAVNSLQSCLDDDFAMPGLEGEVKQDVLKRLPDLIIAT
RLAKFKSKTQSHHRIVVLILMGLKIFVSFLTLIIVLLCLFFVTMQALESSDGGYINRWCQ
TTPHPDNCKHSLGRGEPRYRADFRIMALEAALKLAHHTQSFAGELDKYGRSKRKKAVWED
CCKLVNNTILQLNQTLMGLKNSKISDFDAQTWLSASLTNLQTCFSGSGELNLTTFVSPIR
SSGLTEMISNSLAINQVFLKQTETNSDETEDFPRWVTQKDRKLLQTESIHKRANVIVSQA
KGSKFRTIQSALDHASSIKRGNGRFIIYIRRGVYRENLEIGNDLKNIMFLGDGLRYTIIT
GDRSVGGGFTTYSSATVGVDGTGFIARGITFRNTAGPAKAQAVALRSASDLSVFYACSFE
GYQDTLFVLAQRQFYKLCYIYGTVDFIFGNAAVVFQNCMILARKPLNGQANMITAQGRGD
PFQNTGISIHNSRVMAAPDLKPVVGSVQTFLGRPWQEYSRTVFMKTFIDKHVNPKGWSPW
GNTDFAFSTLYYGEYGCFGPGAATKNRVKWPGYHIITSPREASQFTVERLISGRAWLRAT
EVPFITGL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattcaccatctctttattattgaagttatcggtgttttgcctcatcgcaaca
aatcctgtgtcagcgttaaccgaaaatatatgcgaaagcgcaagcaacccggaggcatgc
aagaaagcgatagagagattaaagaaagacaaagaggttgatcctaacaacaccattcgt
aaggtcatcaactttggccttcaaagaggcctgatccttatggcaaacatgactcattgg
gttcgtcatagaaatttaagggccaacgagcatgccgctgtcaagggttgtttagatgcc
attgatgatggtgttgatgacctgcggaagaccctcaaggaggtggatgaattagaagat
gcccaaaagatacaaaatatgcaagatttcatgtttcacactcataacatcaaaacgtgg
ttgcagactgccgtcaacagccttcaatcttgcctggatgatgattttgcgatgccagga
ttggaaggtgaggtgaagcaagatgtgttgaaaagactcccggatttgataattgcgact
cggcttgcgaaattcaaatcgaaaacacaatcacatcatcgtatcgtcgtcttaatttta
atgggtctgaagatttttgtgtcgtttttaacgttaataatcgtacttttatgtttattc
tttgtaacgatgcaagcactggaatcgtcggacggtggttacatcaaccggtggtgtcaa
acgactcctcatcccgataattgcaagcattctctaggtcgtggcgagccacgttataga
gctgatttccgaataatggctctggaagccgctttaaagctggctcatcatactcaaagt
ttcgccggcgagctcgataaatatggccggagcaaaaggaagaaagcggtgtgggaagat
tgttgtaagctcgtcaataataccattctccagcttaatcaaaccctaatgggactcaag
aacagtaaaatttccgattttgatgctcagacgtggctcagtgcctccctgaccaatctc
cagacttgtttttccggctccggcgaattgaatttgactacgtttgtatctccgataaga
tcgagtgggctgacggagatgataagcaatagtttggctataaatcaggtttttttgaag
caaacagagacgaattccgatgagacggaggattttccgagatgggttacacagaaagat
cggaaactgctgcaaacggagtcgattcacaagagggcgaatgtgattgtgtctcaggcg
aaggggagtaagttccggacgattcagtcggcgcttgatcatgcttcgagtattaaacgt
ggtaatgggagatttatcatctacataagacgaggtgtttacagagagaatcttgagatc
ggaaatgatctgaaaaacatcatgtttcttggcgatggactgaggtacaccattatcacc
ggtgaccggagtgtcggaggaggtttcacaacctatagctctgcaaccgtcggtgtggat
ggcactggattcattgcccgtggcataacattccgaaacaccgcaggcccagcgaaggcc
caagcagtggcacttcggtcagcatctgatctatcggttttctatgcttgtagttttgaa
ggttatcaagacacccttttcgtcttagctcaacgacagttctacaaactttgctacatt
tatggcaccgttgatttcatatttggcaatgctgcggtcgtgttccaaaactgcatgatt
ttagcaagaaaacccttgaatgggcaagcaaacatgataacggctcaaggtcgtggtgat
ccatttcaaaatacgggaatttcaatccataattcacgtgtgatggctgcaccagaccta
aagcctgtggtgggatcggtccagaccttcctaggacgaccttggcaagaatattcaagg
actgtattcatgaaaacattcatcgataaacatgtcaatccaaaagggtggtctccatgg
gggaataccgatttcgcgtttagcaccttgtattacggggaatatgggtgctttggaccc
ggtgcagcaaccaaaaaccgggtcaaatggcccggataccatattatcacaagcccgaga
gaagcatcacaattcactgtggaaaggcttatatcgggtcgggcctggttgcgggctacc
gaagttcctttcatcaccgggttgtga
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