Cynara cardunculus var. scolymus (artichoke): 112508687
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Entry
112508687 CDS
T05604
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112508687
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112508687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_16
TPR_19
TPR_8
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_6
TPR_7
TPR_9
ANAPC3
TPR_10
ARM_TT21_C
TPR_Slam
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
112508687
NCBI-ProteinID:
XP_024969154
LinkDB
All DBs
Position
LG_3
Genome browser
AA seq
1082 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGDVDQAFAAFKIVLDGDRDNIPALLGQACVEFNRGKYSS
SLEMYKRVLQVYPRCPAAVRLGIGLCRYKLGQFERAKQAFERVLQLDPENVEALVALGIV
DLQSNEASGIRGATEKMQRAFDVYPYCATALNYLANHFFFTGQHFLVEQLTETALAATTH
GSTRAHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPQEFILPFYGLGQVQLKLGDFKS
SLSNFEKVLEVYPENCETLKAVAHIYLQLNQTTKAHEALRKAIRIDPRDPEAFLDLGELL
ISTDSGAALDAFKTARNLLKKANEEVSIEILNNIGVLHFERGEFELAQQTFKEALGDGIW
LKLIDSEPQSNSIGESYSDPIRKALYQPMESSLAARVYKDMQLFHNLEKDGIAVELPWDK
ITTLSNLARLFEQLHKTETASILYRLILFKFPEYVDAYLRLAAIAKARNNVPLSIELIRD
ALEVDDKNPDALCMLGDLELKNDDWVKAKDTFRAAKDASNGKDSYATLCLGNWNYFAAVR
SEKRAPKLEATHLEKAKELYTKVLVEHPANMYAANGAGVVLAEKGQFDVAKELFTQVQEA
ASGSVFVQMPDVWINLAHVHFAQGNFALAIKMYQNCLRKFYYNTDSQILLYLARTHYEAE
QWQDCKKTLLKAIHLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRATVAELKNAVR
LFSQLSAASNLQFHGFDEKKIETHVGYCKHLLEAAKVHCDAAELEDQQNKHRQELARQAA
IREEESRLAEEQKKVKLEKRKQEDELKKVMQQEQHLERIKEHWKSSSGSKRKDRAQAEDE
EGAQGERRRRKSNKKRKRDKKAETHMDDQEETEEDNTNTNYYEPENQVNDQVDDDDDNPQ
DLLAAAGLEDSDLDDDAAAPSSNTGRRIRGWSESDEDEPEKRQRSSSPVRDNSVEMQLSD
GE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgtgtatattccagtacaaaattcagaggaggaggtaagagtggctcttgac
cagcttcccagagatgcaactgatattcttgacattcttaaagccgaacaagcacctctc
gatctctggctcattatcgcgagggagtactttaaacaaggaaaaattgaacagttccgc
caaattctggaagaagggtccagtcctgaaattgacgaatactatgcagacgtgagatat
gaaagaatcgccatcttaaatgccctgggggcctattatagctacctagggaaaattgag
acaaaacaaagagagaaggaagaacattttattttggcgacacagtactacaacaaagcc
tccagaatcgatatgcatgagccttcaacttgggttggaaaaggtcagcttttgctagct
aagggtgatgttgatcaggcttttgctgcattcaagatcgtattagatggagaccgagat
aatattcctgctcttcttggccaggcttgtgttgagttcaatcgtgggaaatactctagt
tcattggagatgtacaagagagtcttgcaagtgtatcctcgatgtcctgcagctgtacga
cttggcataggtctctgtcgctacaaattgggtcaatttgagagggccaaacaagcattt
gagcgtgtgttgcagttagatccagaaaatgttgaggcccttgtggcactcgggattgtg
gatttacaatccaatgaagcttctggtattaggggagcaacggagaagatgcaaagagcc
tttgatgtctatccatattgtgcgacggcactaaattatctggctaaccatttcttcttc
actggtcagcattttctagttgagcaattgactgaaacagctcttgctgcaactactcat
ggctcaacaagggcacattcttattataaccttgcacggtcatatcacagcaagggtgat
tatgaaaaggctggactatactacatggcatctgtaaaagaaatcaataagcctcaagag
ttcattttacctttttatggtctgggacaagtacaactaaaattgggagatttcaaaagc
tctctctcaaattttgagaaagtcttggaagtttatcctgagaattgtgagacattgaag
gctgttgctcacatttatcttcagctcaaccagactaccaaggctcatgaagctttgaga
aaagccatccgaattgatccacgagatccggaggcttttctggatcttggagaattgtta
atttcaaccgactctggagctgctttggatgcatttaaaaccgcacgtaatcttttgaaa
aaggcaaatgaagaagtatcaatcgagattctcaacaatattggcgttcttcatttcgaa
agaggagagttcgagcttgctcaacaaacctttaaggaggctcttggtgatggaatatgg
ctcaagctaatagatagtgaaccacaatctaactctattggagaatcatactctgatcct
atcaggaaagcattatatcagcccatggagtccagtttagctgctcgagtgtacaaggac
atgcagttgttccataaccttgagaaggatggtattgcggtggaattaccatgggataaa
atcacaacattgtccaaccttgctagattattcgagcagttgcataaaactgagactgct
agcatattgtaccgtctgatcttgtttaagttcccggagtatgtagatgcttacctaaga
cttgctgctattgcaaaagcacggaacaatgttccactgagcattgaactgattcgtgat
gctctggaggtggatgacaaaaacccggatgcgttgtgcatgctaggtgacttggagctt
aaaaacgatgattgggtcaaggcaaaagataccttccgtgcagcaaaggatgcatctaat
gggaaggattcttatgctactctttgtctggggaactggaactactttgcagcagtacga
tctgagaaaagagctcctaagttggaagctacgcatttggaaaaagccaaggaattatac
acaaaggtcttggtagagcatccagctaatatgtatgctgccaatggtgctggtgtggtt
ttggcagaaaaaggtcaattcgatgttgcaaaggaactttttacacaggttcaagaagcg
gcaagtggaagtgtttttgtccaaatgccagatgtgtggataaatttagcacatgttcat
ttcgctcaaggcaattttgcattggccatcaaaatgtatcaaaattgtttgcggaagttc
tattacaacacagacagtcaaattcttctctatctagcccgtacacattatgaagccgaa
cagtggcaggactgcaaaaagacactacttaaagctattcacttggcaccttcaaattac
acgttaagatttgacacaggtgttgccttgcagaagttctcggcatcgacattacaaaaa
acaaaaaggaccgtggatgaggtgcgtgcaacggttgctgagcttaaaaacgctgttcgc
ttatttagtcagttgtctgcggcttcaaatctacagtttcatgggtttgatgagaagaaa
attgaaacccatgttggatattgcaagcacttgcttgaggctgcaaaagttcactgtgat
gctgctgagctggaagatcaacaaaataaacatagacaagaacttgctcgtcaagcagca
atacgggaggaagagagccggttggctgaagagcagaaaaaagtgaagttagaaaaacga
aaacaagaggatgagctgaagaaggtgatgcaacaggaacaacatctagagcgtattaag
gaacattggaagagtagtagtggctctaagcgaaaagatagggctcaggccgaggatgag
gagggcgcacaaggtgagagaaggagaagaaaaagtaacaagaagagaaagagagacaag
aaagcagaaactcacatggatgatcaagaagaaaccgaagaggataacactaacacaaac
tattacgaaccagagaatcaagtgaatgatcaggtagatgatgatgatgataatccacag
gacctgcttgcagctgctggacttgaagattctgatctggacgatgatgctgctgcacct
tcatcaaatacaggcagaagaatacggggatggtcagagtctgatgaggatgagccagaa
aagaggcaacgtagctccagtcctgttagagataactctgtggagatgcagctaagtgat
ggtgaatag
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integrated database retrieval system
