Cynara cardunculus var. scolymus (artichoke): 112508688
Help
Entry
112508688 CDS
T05604
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112508688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112508688
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112508688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
bHLH_IRO3
Nro1
Motif
Other DBs
NCBI-GeneID:
112508688
NCBI-ProteinID:
XP_024969156
LinkDB
All DBs
Position
LG_3
Genome browser
AA seq
313 aa
AA seq
DB search
MAGHCTFLPDFFHHQFGETTFLSPGADDVVFSVLEADHDHLEGISGGVNPVVSRKLDLSS
PKRKRQKLSVVEADGGPNSDGRQKVSHMTVERNRRKQMNDHLSVLRSLMPRFYVKRGDQA
SIIGGVVDYITELQQILQTLEAKKQRKVYSEVLSPRLVSSPMTLSACPLSPRPSLPISPR
TPQPATPYRSCLPTSNSYLSPSISTSLDHSSPANSFITNSEGGNDLMANLKSAIVEVEVK
LVGGNLLLKTCSKRIPGQATKVIRVLENLSLEVLQANISIVDEAMVNSFTTKIGVECQLS
AEELAQHIQSSFC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcactgtactttcttgcctgatttcttccatcaccagtttggggaaaccact
ttcttgtcacctggtgctgacgacgtcgtcttcagtgtcctcgaagctgatcatgatcat
ctggagggaatttccggtggtgtgaatccggtggtgtctcgtaagctggatctttcatcg
cctaaaaggaagagacagaagctgtctgtggtggaggctgacggtggtcccaactcagat
ggccggcagaaggtgtcgcatatgacggtggagaggaaccggaggaagcagatgaacgac
cacttgagtgttctccgttcacttatgcctcgcttctatgtcaaaaggggagatcaagca
tcaataattggaggagtagttgattacatcactgaattgcaacaaattctacaaaccctg
gaggcaaagaagcaaagaaaagtttacagcgaagtactgagccctaggcttgtttcaagc
cccatgaccttatctgcctgcccccttagccctagaccaagcttgcccattagccccaga
accccacaaccagcaaccccatacaggtcatgtctgccaacttctaattcttacctatct
ccatccatatcaacttcacttgaccattcatcacctgctaattctttcataactaattca
gaaggtggtaatgacctcatggctaatttaaagtcggccattgttgaagttgaggtgaag
ttggtgggcggtaatctccttctaaagacttgctccaagaggataccaggccaagcaaca
aaagtaataagggttcttgaaaacctgtctcttgaagttcttcaggccaacattagtatt
gttgatgaagccatggttaactcctttaccaccaagattggagttgaatgccagctaagt
gcagaggaacttgctcaacacattcaaagttcattctgctaa
DBGET
integrated database retrieval system
