KEGG   Cynara cardunculus var. scolymus (artichoke): 112508695
Entry
112508695         CDS       T05604                                 
Name
(RefSeq) RING-H2 finger protein ATL74-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112508695
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112508695
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    112508695
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-RING_UBOX Prok-RING_1 zf-RING_4 Rad50_zn_hook zf-C3HC4_3 HCMV_UL139 FANCL_C zf_RING_Vps8_fungal zf-RING-like UBZ_FAAP20 Zn_ribbon_IFT122_C zf-C3HC4_4 PHD zf-Nse
Other DBs
NCBI-GeneID: 112508695
NCBI-ProteinID: XP_024969163
LinkDB
Position
LG 3:6760410..6761100
AA seq 198 aa
MDPQLAVSFVVRFPVKFPCGLIMQRLLLDSDTMAPPENGGGGGGSQQHGSYNKEANVDTN
MVIILAALLCALICALGINSIVRCALRCSRRLAFQTSDAAAAGRLAAATTGVKKRALKQF
PVAVYGGGLEIPATECPICLGEFEDGEKVRVLPQCNHGFHVRCIDVWLASHSSCPTCRRS
LVELPAVVAGRSGDGGGG
NT seq 597 nt   +upstreamnt  +downstreamnt
atggatccccagcttgcagtctcttttgttgttcgatttcctgttaaatttccgtgtggg
ttgatcatgcagcgactgctactcgattcagacaccatggcgccgccggagaacggtggt
ggtggtggtggcagccagcaacatgggtcttacaacaaagaagcaaatgtcgatacgaat
atggtgatcatactggctgctttactgtgtgctttgatttgtgctcttgggattaattca
attgtacgttgtgctttgagatgcagccggaggttggcgtttcagacttctgacgctgcc
gccgctggacggttggcggcggcgacgacgggggttaagaagagggcgttgaagcagttt
ccggtggcggtttatggtggtggattagagattccggcgactgagtgtccgatatgcctt
ggagagtttgaggatggggagaaagtaagagtgttgccacaatgcaatcatgggtttcat
gtacggtgtattgatgtatggttggcatcacattcgtcatgtccgacttgccggcggtcg
ttggtggagctgccggcggtggtggcgggaagatccggcgatggtggtggaggctga

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