Cynara cardunculus var. scolymus (artichoke): 112508724
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Entry
112508724 CDS
T05604
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112508724
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
General mRNP proteins
112508724
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
112508724
NCBI-ProteinID:
XP_024969205
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All DBs
Position
LG 1:20075057..20086212
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AA seq
594 aa
AA seq
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MDFDEYEYLEKTVDEPGNRNGSSSKTKDGGAEKNEKGYRRREREEDDGEDEGIVEEERKS
KKSKGVEENGGSRRDRERDREERSSRSERHRSSGRDEVDRERERDRRRSSRDGERDRDRE
RSSRDREKDKDRERERRDKNKDREKDKDREREKREREREREREKERERSRRSRSHSRIER
EREREKELLREKERELESRESRRLKDKKEVVEPEADPERDQRTVFAYQMPLKATEWDVYE
FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAE
KNLVQSNASTGGAGGIAGPYGAVDRKLYVGNLHFNMTELQLKQIFEAFGPVELVQLPTDP
ETGHCKGFGFVQFSQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGAQDSGAKAADFDDD
DGGGLALNAQSRAMLMAKLDRSGIASSVPGALGVAAPLVNGSAPIQASALPINGPSTVPV
PGLAQMVSSIASEPVGNPSECLLLKNMFDPSSEVDPEFDLDIKDDVQEECSNYGRVKHIH
VDKHSAGYVYLRFESVEGAARAQQAMHKRWFARRLISAIFLQPYEYDAKFKGAA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgatgagtatgagtacttggagaagaccgtcgatgagcctggtaaccggaat
ggttcttcttccaagaccaaagacggcggtgccgagaagaacgagaagggttacaggcgg
agggagagagaggaagacgatggggaagatgaaggaattgtggaagaagagcggaagagt
aagaaaagcaaaggggtggaagagaacggtgggagtaggagagacagagagcgtgaccgt
gaagagaggtcttccaggtcggagcgtcacagaagtagtggtagagatgaggtggataga
gaaagagaaagggatcggcggagaagcagtagagatggagagagggatcgagacagagag
aggagttcgagggacagggagaaggataaagatagggaaagagagaggagggacaaaaat
aaggatagggagaaggacaaggatagagaaagggagaagagggagagggaaagggagaga
gaaagggagaaggaaagagaaaggtcaaggaggagccgcagtcactccaggattgagcgt
gaacgtgaacgtgagaaggaattgctgagagaaaaagaaagagaactcgaatcaagggag
agcaggagattgaaagataaaaaagaagtggttgagcctgaagctgatccagaaagggat
caaaggactgtttttgcttaccagatgccgctgaaggcaactgaatgggatgtttatgag
ttcttctcaaaagcaggaaaggtgagagatgtgcgactgatcatggatcggaattcacga
aggtcaaaaggagttgggtatatcgaattttatgatgcaatgtctgttccaatggcaatt
gccctctctggtcatctacttcttggacaacctgtaatggtcaaaccttcggaggctgaa
aagaaccttgtgcartctaatgcttcaactggtggagcaggtggtattgcaggaccctat
ggtgcagttgatcggaagctttatgtgggaaatttgcacttcaacatgactgaattgcaa
ctcaagcagatatttgaagcctttggtcccgtggagctagtgcaactgccaacagatcct
gaaacaggacactgtaaaggttttgggtttgttcaattttctcaacttgagcatgcaaag
gcagcacaaagcttaaatgggaagcttgagatagctgggcggacaattaaggtatcttca
gttacggatcatgttggcgcacaagactcaggagctaaagcagcagactttgatgatgac
gatgggggaggtttggctttaaatgctcaatcaagagcaatgcttatggcaaaacttgat
cgcagtggtattgcatctagcgttcctggagcgcttggagttgcagcacctctagttaat
ggatctgctccaattcaagccagtgctttaccgattaatggcccatccacagttccggtt
ccaggtttggcccaaatggtttcatccattgcttcagagcctgttgggaaccccagcgag
tgtctactactgaagaatatgtttgatccctctagcgaggttgacccagaatttgatttg
gatataaaagatgatgtgcaagaagagtgttccaactatggtagagtgaagcatatccat
gttgacaagcacagtgccggttatgtgtatctgcgatttgaaagtgtggagggagctgca
agagctcaacaggcaatgcataagagatggtttgcccgcagattaatatcagccattttc
ttgcaaccatacgagtatgatgcaaagttcaaaggtgcggcttga
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