Cynara cardunculus var. scolymus (artichoke): 112508731
Help
Entry
112508731 CDS
T05604
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112508731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112508731
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112508731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
112508731
NCBI-ProteinID:
XP_024969210
LinkDB
All DBs
Position
LG 3:2789557..2802772
Genome browser
AA seq
791 aa
AA seq
DB search
MMISDAMEDEEKWLAEGIAGIQHNAFYMHRALDSNNLREALKYSAQLLSELRTSRLSPHK
YYELYMRAFDELRKLEIFFKEEERHGCSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDIGSEYEGDDDTVMDAVEFV
LQNFSEMNKLWVRMEHQGPARVRDKMEKERNELRDLVGKNLHVLSQIEGIDLDLYKETVL
PRVLEQVVNCKDELAQYYLMDCLIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLM
ERLSSYAASSPEVLPEFLQVEAFAKLSSAIGKVIETQGDMPIVGAITLYVSLLTFTLRVH
PERLDYVDQVLGLCVKKLANKPKLEDSRATKQVVALLSAPLEKYSDIVTSLTLSNYPRVM
DHLDNGTNKIMAVVIIQSIMTNHAYVSSADKVEVLFELIKGLIKDLEGDSEDELDEEDFN
EEQNSVSRVIHVLYNDDPEEMLKIICTVRKHIMTGGPRRLPFTIPPLVFSALKLVRRLQN
QDGDVSGEENPATPRKIFQLLNQIIEALSYVPSPELALRLYLQCAEAANDCDLEPVAYEF
FTQAFVLYEEEIADSKAQVTAIHLIIGTLQRTNVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDHDGIKDGERVLLCLKRSLRIANAAQQMASVARGSSGPVTLFVEIL
NKYLYYFEKGNPQITSAAIQGLIELIKTEMQSDTVTPDQTSDAFFACTLRYIQFQKQKGG
AMGEKFDTIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcagatgctatggaagacgaagagaaatggttagcagaaggaatcgctgga
attcaacacaacgctttctacatgcatcgcgccctggattctaataatctcagagaagcc
ctaaaatattcggcacagctgttgtctgagcttcggacttcaagattatctcctcacaaa
tactacgagctctatatgagagccttcgatgagttgagaaagttggagatcttctttaag
gaagaagagaggcatggctgttccgtcgtggacttgtatgaacttgtccaacatgctgga
aacattttacctagactgtatctcctgtgtacagtagggtctgtttacataaaatcaaag
gaagctcctgctaaggacgttcttaaagaccttgtcgaaatgtgtcgtggggttcagcat
cccatacgcgggctttttcttaggagttacctggcacaaattagtagagataagctccca
gacatcggttctgaatatgaaggagatgatgatactgtcatggatgctgtagagtttgtg
ctgcagaatttttcggagatgaataaactttgggtccggatggagcatcagggacctgcc
agagtgcgagataaaatggaaaaggagaggaatgagctgcgtgatcttgttggtaaaaat
ctgcatgtccttagtcagatagagggcattgaccttgatttgtacaaagaaacagttctt
cccagggtcttggagcaggttgtcaactgtaaggatgagcttgcacagtattatctgatg
gattgcctgattcaggtgtttccagatgagtatcatttacagactcttgaaaccctgtta
ggagcttgtccccagctccagcctacggttgacatcaagacagtactctcccaacttatg
gagagactatcaagttatgctgcttctagtccagaagtcctaccagagttccttcaagta
gaagcttttgcaaaattaagcagtgctatcgggaaggttattgaaactcagggtgacatg
ccaattgttggagcaattactttgtatgtttctcttctcacattcactcttcgtgttcat
cctgagcgacttgattacgtggatcaagtgctgggattatgtgtcaagaaacttgcaaac
aaaccgaagcttgaagatagtagagctacaaaacaagttgttgcacttttgagcgcccca
ctggaaaaatacagcgatattgtcacttccttgacattgtctaattatcctcgagtcatg
gatcaccttgacaatggaactaataaaatcatggctgtggttattattcaaagcataatg
actaaccatgcttatgtatcatctgctgacaaggttgaggttctttttgaacttattaaa
gggcttataaaggatttggagggagattcggaggatgagcttgatgaggaggattttaac
gaggaacaaaattctgtttctcgcgttatacatgtgctatataatgatgacccagaggag
atgttgaagattatatgtactgtgcgaaagcatatcatgactggaggccctaggcgtctt
cctttcacaattcctcctcttgtgttttctgctttgaagttggttcggcggttgcaaaat
caggatggggatgtatctggagaagaaaatccagccacgcctaggaaaatctttcagctc
ctaaaccagataatcgaggcactttcatacgttccatctcctgaattggcattgaggttg
tacttgcagtgtgcagaggctgccaatgactgcgatctggaaccagttgcttatgaattc
ttcactcaagcatttgttttatatgaggaagaaattgcggactccaaagctcaagtgact
gcaattcacctaataattggaacccttcagagaacaaatgtatttggtgtggagaatagg
gataccttgacacataaagccacagggtattcagccaaacttctaaagaagccggatcaa
tgcagagcggtttatgcatgttcacatctgttttgggtggatgatcacgatggaatcaag
gatggagaaagagtcctcctttgccttaaacgttcattaaggattgcaaatgctgcacaa
caaatggcaagtgttgcacgaggtagcagtggccctgttactctctttgtcgaaatactc
aacaagtacctctattatttcgagaaaggcaatccacagataacgagcgctgcaatacaa
gggcttatagagttgatcaaaaccgaaatgcaaagtgacacggtaacacccgatcaaact
tcggatgctttctttgcttgtaccttaaggtacattcagttccagaaacagaaaggtgga
gcaatgggggagaaatttgataccattaaggtgtga
DBGET
integrated database retrieval system
