Cynara cardunculus var. scolymus (artichoke): 112508739
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Entry
112508739 CDS
T05604
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112508739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112508739
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112508739
Membrane trafficking [BR:
ccav04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112508739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
112508739
NCBI-ProteinID:
XP_024969231
LinkDB
All DBs
Position
LG 3:complement(36385163..36394900)
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AA seq
1029 aa
AA seq
DB search
MADFRVCLLLSVLFVAGLCVESKYMIYNTSQGVVKGKLNVHLVPHTHDDVGWLKTVDQYY
VGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWRDQSEATQATVKRFVRS
GQLELINGGWCMHDEAAPHYIDMIDQTTLGHKFIKEQFNVTPRIGWQIDPFGHSAVQAYL
LGAEVGFDSLFFGRIDYQDRAKRKDEKHLEVIWRGSKSLGSSSQIFAGAFPENYEPPSGF
YFEVNDDSPIVQDDITLFDYNVQERVSDFVAAALSQANITRSNHVMWTMGTDFKYQYAES
WFRNMDKLIHYVNQDGRVNALYSTPSIYTDAKHAETDSWPLKEDDYFPYASDVDAYWTGY
FTSRAALKGYVRMLSGYYLAARQLEVMKGRNKAGPTTDSLGDALAIAQHHDAVSGTSQQH
VANDYAKRLSIGHKEAKAVVADSIACMVSSKSGCASSAANFQECPLLNISYCPSSEADLS
SGKKLVVVVYNSLGWKRYDVIRLPVVSENIAVYDSNGKQVESQLLPVLNESIALRNYYTT
AYTGKSPSSTPKYSLAFTASVPPLGFSTYVIVSTKRPASNFVKDALYKSTMTGKDLIEVG
TGNLKLIYSGSEGKLTHYVNSRSSIESSVKQSYSYYAGFDGTTGEQASGAYIFRPNGTYP
IGSQEETPITVLRGTIYEEVHQKINPWIYQITRVYKNKEHAEVEFTVGPIPIEDGVGKEI
VTQITTTINSNKTFYSDSNGRDFLQRIRDYRADWDLEVNQPIAGNYYPINLGIYLKDHRS
EFSILVDRSVGGSSIVDGQLELMLHRRLLYDDGKGVAEALNETVCVGNDCRGLAIQGKYY
LRIDPLGEGAKWRRSYGQEIYSPLLLAFTEQDGQQGPNFEVSTFSGMDSTYTLPDNVALL
TLQELEDGKVLLRLAHLYEIGEDKDLSVMTSVELKKLFAKRKITDVSEMSLSANQGRDEM
EKKRLVWKAEGSKNDKPTALRGGPVDPQKLVVELAPMEIRTFVLTLVPNALKGKISRTRR
LVGSDISLQ
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttcgagtttgtttgctgttaagtgtactctttgttgctggattgtgtgtg
gaatcgaagtatatgatttacaatacttcacagggggttgtgaaggggaagcttaatgtt
catttggtaccgcatacacacgacgatgttggttggttgaagactgttgaccagtactat
gttggatccaataactctattcagggagcatgcgttcaaaacgtgcttgattccttggtt
ccagcattgttggctgataagaatcggaagttcatttatgttgaacaggcatttttccag
cgctggtggagggaccagagtgaggcaacccaagctacggtcaaacgctttgttagatcg
ggacaacttgagttgataaatgggggatggtgcatgcatgatgaagcagccccacattat
attgatatgattgatcagacgacgttggggcataaatttattaaagagcaattcaatgta
acaccgaggattggttggcagatagacccatttggacattcggcagtgcaggcttaccta
ttgggggctgaggttggatttgattctcttttctttgggcgaattgattaccaagacaga
gctaagagaaaagatgaaaaacatctcgaagttatctggcggggttccaagagtcttggt
tcgtcttcacagatttttgctggtgctttccctgagaattacgaacctccaagtggtttc
tactttgaagtcaatgatgattctcccattgttcaggatgacatcactttgtttgactac
aacgtccaagagcgggttagtgattttgtggctgcggccttgtcacaggcaaatattact
cgctcaaatcatgtaatgtggacgatggggacggacttcaaatatcagtatgcagagtca
tggtttcggaatatggacaagttaattcattatgtcaatcaagatggtcgtgtcaatgct
ctctattcgacgccatctatttacactgatgctaaacatgctgagactgactcctggcct
ctcaaagaagacgactattttccatatgcaagcgacgtagatgcctactggacaggatac
tttactagtagggcagctctcaagggatatgtcagaatgttgagcggctattatctggca
gcaaggcaattggaggtaatgaagggaaggaataaagcagggcccactacggactctttg
ggtgatgctttagcgatcgctcaacatcatgatgctgttagtggtacttcgcaacaacat
gtggcaaatgattatgcaaaacggctgtcaataggtcacaaggaggccaaagcggtggtt
gccgattcaatagcttgcatggtatcatcaaaatctggatgtgcaagttcagctgctaat
tttcaagagtgtccgcttctgaacataagctattgcccttcatctgaggccgatctatct
tctggcaaaaagttggtggttgttgtctacaattccctggggtggaagagatatgatgtt
ataagacttccggttgtgagtgagaatattgccgtctacgactccaacggaaaacaagtt
gaatctcaacttctccctgttctaaatgaatctatagccctaagaaactactacacaact
gcatatacgggtaaatcaccaagttcaactcccaagtattcgcttgcatttacagcatct
gttccgcctctgggttttagcacatatgtgattgtgagcacaaaaaggccagcttcaaat
tttgtaaaagacgcattatacaagtctaccatgacaggaaaagatctcatagaagtaggc
acaggaaatttgaagttaatctattctggaagtgaaggaaaactcactcattatgttaat
agtcgaagctctattgaatcctctgtgaagcaatcatatagctattatgctggatttgat
ggcaccacgggggagcaggcatctggagcatatattttccgtccaaatggtacataccct
attggttctcaggaggagactcctataacagttttgagggggacgatatatgaagaagta
catcagaaaataaatccatggatttaccagatcactagagtgtacaagaataaggaacat
gctgaagtcgaatttactgttggtcccatacctattgaagatggagttgggaaagagatt
gtaactcagatcacaaccaccataaatagcaataaaacattttactcagattctaatggg
cgtgatttccttcaacggattcgagactatagagctgactgggatcttgaagtgaatcag
cctattgcaggaaattattatcctatcaatcttggaatttacttgaaagatcacagaagt
gagttctcgatcttggtagatagatccgtaggtgggtccagcattgttgatgggcaactg
gagttgatgctccataggagattgctgtatgatgatggaaagggtgttgcagaggcacta
aatgaaacagtttgtgttggcaacgactgtagaggattagctatccaagggaaatactat
cttagaatcgatccgctaggagagggagccaagtggcgccgctcgtatggtcaggagatc
tattctccacttcttttggccttcactgagcaggatggacaacaagggccaaactttgaa
gtgtcgacattttcaggaatggattccacctacactctccctgataatgtagcattgctg
accctccaggagctggaagatggaaaagttcttctgcgtttggcacacttatacgagatt
ggagaggacaaggatctctcggttatgacaagtgtcgagttgaagaagctttttgcaaag
aggaagataacggatgtctccgaaatgagcttatctgctaaccaaggaagggatgaaatg
gaaaagaaaagattggtgtggaaggcagaaggctccaagaatgataaaccaacagccctg
aggggtgggcctgttgatcctcaaaagctggttgtggaacttgcccctatggaaatacga
accttcgtcctcactctagttccaaatgctctaaaagggaagatttctcggactcgaaga
ttggtcggctcggatatttcgctacaataa
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integrated database retrieval system
