Cynara cardunculus var. scolymus (artichoke): 112508742
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Entry
112508742 CDS
T05604
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112508742
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112508742
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_5
DUF6170
Motif
Other DBs
NCBI-GeneID:
112508742
NCBI-ProteinID:
XP_024969236
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All DBs
Position
LG 3:40015936..40019015
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AA seq
905 aa
AA seq
DB search
MLQIHHHLLLLVFFINFMFIVSAGTLKIGVGVVLDMDSSVGKTSSLCIKMAIDDFYQTHH
NYTTKIIPHIHHSESDTLQAASAAIQLLKYDQVIAIIGPHTSSQADFVVDIGNKSKVPIL
SLATSTSISPIENPYFIRVSHNSSSQAQPIAALIKHFTWREVVFVYEQSDFGRGLLPYLS
EALLNIGAHIKYRSVISPSPSHAEISEELNKLKENQARVFVVHLSPKSASLFFKKANETG
MMQKGYVWIITDVLTSLLHTLDISSMQGVVGVKPYIPKSIKLNNFEKRWRRRFHTENPNL
EMERIELDVFGIWSYDATYALAMALERVGSDIAPTFHRKNNPVTDLDAIGTSKLGPRLLS
EIGKTRLNGLSGDFSVVDGQLQPLDYQIVSVIEKEERFVGLWTWHHGISENLRDIKWPGN
SNSIPQGLRVGYPSNGVFPQFISNSKDNNTNEDKPTGFCVEVFEAVMEALQPQAPPYGYN
HYTIDDGHTSRSYDDLVYQIFLKKFDMVIGDVTIRANRSNYVDFTLPYTESGVSMIVPIK
VDDRKGIWIFLKPLEKGLWLTSFAFFIYTGVVVWILEHRVNKEFRGRPYKQVGMIFWFSF
STLVFAHKEKTISNLSRFVVIVWIFVVIVLQSSYTAGLTSMLTVQQLQPDFTDIHDLLAQ
GDYVGYKDGSFVGRMLLDMGFNINNLKKYTSLEDYHEALSKGSKNGGVSAIFEELPYVNA
FMAKYCTKYIKVGPTYKTAGFGFAFPLGSPLVPLVSRAILEVREKKLSKIWDIYFKPEKE
CTPKNETAVTPDRLSLDSFIGLFLIAGISSTSALMISILKFLYENRGILASEDSICQKMY
AMARTFDQENDQSSYKGSKKTIDALGTTDDDDLSVIEDDITSNAPSPESIINHEAPDIVE
TTIER
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgctacagattcatcatcatctgctgctccttgttttctttatcaacttcatgttcata
gttagtgcagggacactaaagataggagtaggggtggttcttgatatggattcaagtgtt
ggaaagaccagcagcctctgcattaaaatggccatcgatgatttctatcaaacccaccac
aactacaccaccaaaatcatccctcatattcaccactccgaatctgatacactccaagct
gcttctgcggctatacagcttttaaaatatgatcaagtaatcgcgatcataggacctcac
acgtcctcgcaagcagatttcgtagtcgatattggcaacaaatctaaggttcccatacta
tctctggctacatccacctctatctccccaatcgaaaatccttacttcatccgcgtatca
cacaactcctcctctcaagcccaacccatagcagcactcatcaaacattttacttggcgg
gaagtggtgtttgtttatgaacaaagtgattttgggaggggtttgcttccgtatttgtct
gaagccctgttaaatattggtgcccatatcaaatatcggtctgttatatctccttctcct
tcacatgccgagatttctgaggagctcaacaagttaaaagaaaaccaagcacgggttttt
gtggtccatttgtcaccaaaatcggcttctctctttttcaagaaagcaaatgaaacagga
atgatgcaaaagggatatgtctggatcattactgatgttctcaccagccttttgcatact
ttggatataagttcaatgcaaggagtagtgggcgtaaagccttatatcccgaaatccatt
aagctaaacaactttgaaaagagatggagaaggagatttcacactgagaacccgaaccta
gagatggaaagaatcgaacttgatgtgtttgggatatggtcatacgatgccacttatgca
ctagcaatggcattggagagagttggcagtgatattgctcccactttccatcgaaaaaac
aatcctgtaacagatctagatgccatcggaacctccaaactaggaccaaggctactttca
gagatcggcaagacaagactaaacgggttgagtggtgatttctctgttgttgatggacaa
ttacaaccgttggattaccaaatagtgagcgtaattgagaaggaagagagattcgtgggc
ttgtggacttggcatcatggaatttcagagaatcttagggatatcaaatggcctggtaac
agtaacagcatccctcaaggtttaagagttggatatccatcaaatggcgtgttccctcag
tttattagtaactcgaaagacaacaacacaaatgaggacaaaccaacaggattttgtgtg
gaggttttcgaggcagtaatggaagcattacaaccacaagctccaccctacggatacaac
cattatactatcgatgacggtcacacttcgcgaagctacgatgatcttgtttaccagatc
ttcctcaagaaatttgatatggtgattggggacgtgactatccgggcaaacaggtcgaac
tatgtcgacttcactttgccatatacagagtcgggagtctcgatgattgttccgatcaaa
gttgatgacaggaagggtatatggatatttctgaaacccctagaaaagggcttgtggtta
acatcatttgctttctttatatatactggagttgtggtttggattctcgagcatcgtgta
aacaaagaattccgtggccgaccttataaacaagtcggaatgatcttctggttttctttc
tcaacccttgtttttgcccacaaagagaagacgataagcaacttatctagatttgtggtg
attgtgtggatatttgtggtgattgtactacaatcaagctacacagcaggcttaacatct
atgttgacagtacagcagcttcaaccggacttcaccgatatccatgatctcctggcacaa
ggagactatgtagggtacaaggatggttctttcgttggacggatgttgttggatatgggt
tttaacataaacaacttaaaaaagtacacaagcttggaagattatcatgaagccctttcg
aagggtagtaaaaatggaggtgtttctgccatttttgaggagcttccttatgtgaatgcg
ttcatggctaaatattgtaccaagtacatcaaggttggtccaacctacaagactgcaggc
tttggctttgcatttccattagggtctcccctagtgccgcttgtttcaagagcaatctta
gaggtcagggagaagaaactaagcaagatttgggatatatactttaaaccagaaaaagag
tgcacaccgaaaaatgagactgctgtgacccctgataggctctcgctggatagttttatt
ggtctttttctgattgctggcatatcatcaacttctgctcttatgatttctatcttgaaa
ttcttgtatgagaatagaggtattttagcatctgaggattcaatttgccaaaagatgtat
gcaatggcaagaacttttgatcaagaaaacgatcaaagttcatacaagggatcaaagaag
acaattgatgcactgggcacaacagatgatgatgatttgtctgtaattgaagatgacatc
accagcaatgccccaagcccagagagtatcattaaccatgaagctcctgacattgtagaa
acaacaatagagagatga
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