Cynara cardunculus var. scolymus (artichoke): 112508743
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Entry
112508743 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112508743
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112508743
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112508743
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112508743
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112508743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
112508743
NCBI-ProteinID:
XP_024969237
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All DBs
Position
LG 3:39015639..39026305
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AA seq
480 aa
AA seq
DB search
MPTVSVKWQKELYPAVEIDTTQPPYVFKCQLYDLTGVPPERQKIVMKGGLLKDDSDWSKL
GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLFNLGNTCYMNSTMQ
CLHSVPELKSSLIEYPQAGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRK
KYPQFGQLHNGSFMQQDAEECWTQILYTLSQALRSPSSSQNTDTVKALFGIDLVSRVHCA
ESGEESLETESVYSLKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAVYLKDSHINGL
PKYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVFDLCSDDLRKQLEAPRQMLRDEDGR
KAGLKLKEKSSASVDNDVKMSDAENGSGESSKATSGEGVVSDKKTQLTGVYDLVAVLTHK
GRSADSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTVAM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtgagtgtaaaatggcaaaaagagctatacccggcagtggagatagataca
acccagcctccctatgttttcaaatgtcagttgtatgacctcacaggggtgccacctgaa
aggcaaaagatagtgatgaaaggtggattactaaaggatgactctgattggtcgaaactg
ggggtgaaagagggtcaaaaattaatgatgatgggaactgctgatgagattgtaaaggct
ccagagaagggccctgtttttatggaagaccttccagaagaagaacaagtagttgctgtg
gggcattctgctggattattcaatctgggaaatacctgctacatgaattccaccatgcaa
tgcctgcattcagtcccagagcttaaatcttcattgattgagtatccacaggctggcaga
agcaatgatttggatcagtcatctcatctattgactgttgcaacacgagacttgtttaac
gagctcgataaaaatgtcaagccagtcgctccaatgcagttttggatggtattgcggaaa
aagtatcctcaattcgggcagctgcataatgggtcctttatgcaacaggatgctgaagaa
tgctggacgcagattttgtatactctttctcaggctcttagatcaccaagttctagtcaa
aatactgatacagtgaaggcacttttcggcattgaccttgttagcagggtgcattgtgcg
gaaagtggtgaagaaagtttagagacagaatcggtttattctcttaaatgccacatatca
catgaggtgaatcatttgcacgagggactgaagcatgggctgaaatcggagctagaaaag
gcttctccttctttggggcgcagtgcggtttacttgaaggattcacatattaatggattg
ccaaagtacttaactattcagtttgttcgatttttctggaagagggaatctaatcagaaa
gcaaagattttgaggaaagtggattatccattagagttggatgtttttgatctttgttca
gatgatctccgcaaacagctggaagctcctcgtcagatgctaagagatgaagacggtaga
aaggctggtttgaaactcaaagaaaagagctctgcttcagtggacaatgatgttaagatg
tctgatgcagagaatggaagcggagaatcatctaaagctacttccggagaaggtgtcgtg
tctgataagaaaacacagttgaccggagtatatgatttggtcgctgtgctgactcataaa
ggccgaagtgccgattcaggtcattacgttgcttgggtcaagcaagaaaatgggaaatgg
atccagttcgacgatgataatcctatcccacaaagggaagaagatataacaaagctttct
ggaggaggtgattggcatatggcttacatttgcatgtacaaggctcgtaccgttgccatg
taa
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