Cynara cardunculus var. scolymus (artichoke): 112508749
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Entry
112508749 CDS
T05604
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112508749
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
112508749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5089
V-SNARE_C
ATG16
DUF7712
Miga
Motif
Other DBs
NCBI-GeneID:
112508749
NCBI-ProteinID:
XP_024969248
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All DBs
Position
LG 3:complement(32182629..32185659)
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AA seq
307 aa
AA seq
DB search
MFGLKKPHLHRPAKQNSVDPRLPSQPSANPFDSDDEIDKRSTQKPSKRTSSEPSLSTPNS
TISLFDDNEVKGTSSSSGYSLDHASRNKYKNDFVDSGGIENQSTQELEHYAAYKAEETTK
TVNSALKIAEDIREGATNTMIALHQQGEQINRTHMAAADIEQDLGRGEKLLGSLGGIFSR
TWKPKKGQTIKGPTHIRDDPDRRKGNHLEQREKLGLTTTPNKGPSRSRTPLPESSDAMQK
VEYEKGKQDDGLSDLSDILGELKEMAVDMGSEIERQNKALNPLQDDIEEINFRVKGANQR
TRRLLGK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtctcaagaaaccccatcttcacagacctgctaaacaaaactcagttgaccct
cgattacctagtcaacctagtgccaatccatttgattctgatgatgagattgacaaaagg
tcaacccaaaaaccctcaaaaagaacttcatctgaaccttctttatcaaccccaaattca
acaatcagtctttttgatgataatgaggttaaagggacctcatcttcctctgggtactct
cttgatcatgcatcaagaaacaaatacaagaacgattttgttgattctggtggtatagaa
aaccaaagtacccaagaattggagcattatgctgcatataaggctgaagagactacaaag
actgtgaatagtgcactaaagattgcggaggatatcagagaaggtgccaccaacacgatg
attgctttgcatcaacagggtgagcagatcaatcgaacccacatggctgcagccgacatc
gagcaggatcttggcaggggtgagaagctgttgggaagtcttgggggcattttttcaagg
acttggaagcctaaaaagggtcagacaataaaaggacctacacacattagagatgatcct
gatagaagaaagggcaaccatttggagcaaagggaaaaactgggccttacaactaccccg
aataagggaccctcacgttcaagaacgccacttcctgaatcctccgatgcaatgcagaaa
gttgagtatgagaaaggaaagcaagatgatgggctctcggacttgagtgatatactgggg
gaactcaaggaaatggccgttgacatgggttctgagatcgaaaggcaaaacaaggctctg
aatcctcttcaggacgatattgaagagatcaatttccgagtgaaaggtgccaatcaacgt
actcgccgtttgctcggaaaatag
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