Cynara cardunculus var. scolymus (artichoke): 112508778
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Entry
112508778 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
ccav04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112508778
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112508778
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112508778
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112508778
03036 Chromosome and associated proteins [BR:
ccav03036
]
112508778
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112508778
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112508778
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112508778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF3037
DUF349
Motif
Other DBs
NCBI-GeneID:
112508778
NCBI-ProteinID:
XP_024969295
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All DBs
Position
LG 1:11764390..11773944
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AA seq
518 aa
AA seq
DB search
MIKQILNRIPRKTHKSTDNRDGGNSNLSSNASTSSRGNSDAALSRSGSSNPASGHGQTLH
AASGTGLAGLNHGNNKLDHALNSKLNGNPAVSTAYEALPSFKDVPNSEKQNLFIRKLNMC
SVVFDFTDTTKNLKEKEIKRQTLVELVDYVSSANGKFSETVMQEIVKMVSINIFRRLTPQ
PRDNKVLETFDGEEEEPSMDPAWPHLQLVYEFLLRFVASPETDAKLAKRYIDHAFILRWL
DLFDSEDPREREYLKFVLHRMYGKFMVHRPYIRKAINNIFFRFIFETEKHNGIAELLEIL
GSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSYCITQFVEKDCKLADTVIRG
LLKYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMVPLFRQIAHCLSSSHFQVAERALF
LWNNDHIENLIKQNRKVILPIIFPALERNTKTHWNQAVRSLTLNVRKIFSDADPELFEEC
LQKFKEDESRKQESKAKREAIWKRLEEIAAKRSSTNAR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatacttaataggatcccccggaagacacataagtcaaccgataatcga
gatggaggaaactctaatttatcttcgaatgcatcaaccagttcaaggggaaatagtgat
gcagcattaagtcgatctggtagctcgaatcctgcatctggtcatgggcaaactcttcat
gctgcttcaggtactgggctagctgggctaaatcatggcaataacaagcttgaccatgct
ttgaattcaaagttgaatggcaatccggcagtttctactgcctacgaggctttgcctagc
ttcaaagatgttccaaactctgagaagcaaaacttgttcatcagaaagttgaatatgtgt
tctgttgtgtttgatttcactgacacaacaaagaatctaaaagaaaaggagatcaaaaga
cagactttggttgaacttgtcgattatgtttcttctgcaaatgggaaattttcagaaact
gtcatgcaagaaattgtgaagatggtgtcaataaacatatttaggagactcactccacaa
cctcgtgataacaaagtgttggaaacttttgatggggaagaagaggagccgtccatggat
ccagcatggcctcatttgcaactagtgtacgagttccttctaaggtttgtagcatcacca
gagacagatgcgaagctggctaaaaggtatattgaccatgcttttattttgaggtggctg
gatttatttgactctgaggatccaagagaacgcgagtacttgaaatttgtactccatcgt
atgtatggaaagttcatggtacaccgtccatatatcaggaaagccatcaacaatatattc
tttcggttcatttttgaaactgaaaaacataatggaattgcagagctcctagagattcta
ggcagcattattaatggttttgctttgccgttgaaggaagagcacaagctctttcttgtg
agggcactaataccccttcacaagccaaaatgcataccgatgtaccatcagcagttatct
tactgcatcacccaattcgttgaaaaagactgcaaacttgctgatactgttattagaggt
ttattgaagtattggcctatcacaaacagttccaaagaggtgatgttcttgagtgagctt
gaggaagttttagaagctactcagcctccagaatttcaaagatgtatggtgcctttgttt
cgccagatcgctcactgcttgagcagttcacactttcaggtggctgaaagagcattgttc
ctgtggaacaatgatcatatcgagaacctaataaaacagaaccggaaagtaatcctgccc
atcatattccctgccttggaaaggaacaccaaaacccactggaaccaagccgtgagaagc
cttactttaaacgttcgaaagatcttctctgatgcagaccctgaactcttcgaggaatgc
ttacaaaagttcaaagaagacgaatcccgaaagcaagaaagcaaggcgaaacgtgaagcg
atatggaaacgcttagaagagattgctgcaaagagatcatccaccaatgcaaggtaa
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