KEGG   Cynara cardunculus var. scolymus (artichoke): 112508793
Entry
112508793         CDS       T05604                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013  Nucleocytoplasmic transport
ccav03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112508793
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112508793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccav03016]
    112508793
Transfer RNA biogenesis [BR:ccav03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    112508793
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd Xpo1 TPR_TNPO3_IPO13_3rd NeuB CRM1_C Importin_rep
Other DBs
NCBI-GeneID: 112508793
NCBI-ProteinID: XP_024969319
LinkDB
Position
LG 3:33062111..33084641
AA seq 834 aa
MNWLRDEMNAHPDIVPSFLELLRVLPEEIFNYKIAARPDRRRKFENELASTMDVALGILT
ACLNIPELKEQALDAFSSWLRLRHRLPASVLATHPLVLTALSSLTSDELSEAAVDVISEL
IHYTSARNLEGFSVQMPLIQAIVPQVMNLKPQLRDSSKDEEDVKAIARLFADMGDSYVEL
IATGSDESMLIVHALLEVAAHPEYDIASMTFNFWHNLQICLIERESYVSLGNESLIDVER
NRRVQVFRSSYESLVSLVSCKVQYPQDYSELSKEDQKDFKQTRYAVADVLIDAALVLGGE
PTLKILYVKLVEALSGHQNGDMMDWRPSEAALYCIRAISDLVPLTEAEVMPQIMSLLPKL
PHQSLLLQTVCLTVGAYSKWLDAAQSGLSFLPSVIDILISGMSMSEDSAAAAALAFRHIC
DDCGKKLRGSLDGLFQIYQRAMTGEGSFKVAAQDSLHLVEALSIVITELPPDQAKKALEA
LCIPAVAPLQEVINQGPLVLGQKPAREITVHIDRLANIFRYVNNPEAVADAIQRLWPLFK
AIFDTRAWDMRTMESLCRACKHAVRTSKRFMGVTIGAMLEEIQGLYKQHHQPCFLYLSSE
VMKIFGSDPSCADYLKVLIESLFSNTACLLTKIQDFTSRPDIADDCFLLASRCIRYCPHL
LFPSPVFPSLVECSMIGITVQHREASNSILSFLSDIFDLGRSSQGQQFISIRDSVIVPRG
ASITRILVAASTGALPSSRLETVAYALLALSRAYGANALEWAKESVSLIPVSAATDMEKS
RFLQALSDAASGADIKGLTVPIEELSEVCRRNRTVQEIVQEALRPLELNLVYVS
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgaattggctcagagatgagatgaatgcacatcctgatattgtaccaagttttctcgag
cttcttagagtcttaccagaggaaatcttcaattacaagatagctgctcgtccagacaga
cgacgcaaatttgaaaatgaacttgcctctacaatggatgttgctcttggcattttgact
gcatgcttaaacatcccagaactgaaagagcaggctctggatgctttttcatcttggctt
cgactaagacataggcttcctgcatctgtgcttgctacacacccattggtgctaacagct
ctctctagcttaacgtctgatgagctttcagaggcagccgtggatgtaatttctgaattg
atacattacacgtctgcaagaaacttggagggattttcagttcaaatgcctttaattcaa
gctattgtgccacaagttatgaatctaaagccacaacttagagattcttcgaaggatgag
gaagatgttaaggccattgcaagactatttgctgatatgggtgattcctatgttgaattg
attgcaactggttcagatgaatcgatgttgattgttcatgcactactggaagttgctgca
catccagaatatgatattgcttccatgacatttaacttctggcacaatcttcagatttgc
ttgatcgagagagaatcctatgtatcgcttggtaatgaatcattaattgatgtggagaga
aataggcgggtgcaggttttccgttcatcatatgaatcacttgtatccttggtcagttgc
aaagttcaatatcctcaggattactcagaactttcaaaagaggatcagaaagatttcaaa
cagacaagatatgctgtcgcggatgtcttaattgatgcggcattagttttaggaggtgaa
ccaacacttaagattctgtacgtgaagcttgttgaggctctaagtgggcaccaaaatggt
gatatgatggattggcgaccttcagaggctgcactatattgcatcagggccatatcagat
cttgttcccttaaccgaagcagaagttatgccccagattatgtcattgcttccgaaactt
cctcatcaatcactattacttcagacagtatgcttgactgtaggagcttattctaaatgg
cttgatgctgcacaaagtggactctcttttctgccttcagtcattgatattcttattagt
ggaatgagtatgtctgaagattctgcagcagctgctgccttggctttcagacacatctgt
gatgactgtgggaaaaagctccgtggatctctagatggtcttttccaaatataccaaagg
gcaatgactggggaaggttcttttaaagttgcggctcaagattctttgcatcttgttgaa
gccttaagtatagttatcactgagcttcctccagaccaggctaagaaagccctcgaggca
ctttgcatacctgctgttgcacctttacaggaagtgattaatcaaggtcctttggtattg
ggtcaaaaacctgctcgtgaaatcactgttcatattgatcgacttgcaaatatatttagg
tatgtaaataatccagaagctgttgctgatgcaattcaaagactttggccacttttcaaa
gccatctttgatacccgtgcttgggatatgcggacaatggaatcactctgccgagcctgt
aaacatgctgtgagaacatctaaaaggttcatgggagttacaattggagctatgcttgag
gagatacaagggttatataaacaacaccaccaaccatgtttcttatatctctctagtgag
gttatgaagatatttgggtctgatccttcttgtgcggattacttaaaagtgttgatcgaa
tctctatttagcaatacagcgtgtttgcttacaaaaattcaggacttcacttccaggcca
gatatagcagatgattgttttttgttggcgtcaagatgcattcgctattgcccgcatttg
cttttcccatctccagtattcccatcattggttgaatgctccatgataggaatcacagtg
cagcacagggaagcgtcaaattctatcctaagtttcttatccgatatatttgatctggga
agatctagtcagggacagcaattcatttctatcagggatagtgttattgtccctcgaggt
gccagcattactagaatcttggttgctgcttcaaccggggctctcccaagttcaagatta
gaaacggtggcatatgctctgctagcactatcacgagcatatggagcaaacgctctagaa
tgggctaaggagagcgtgtctttaattccagtttctgctgccacagacatggaaaaatca
agatttttacaggcattgtcagatgcagcatccggtgcagatatcaaaggattaacagtt
ccaatcgaagagctgtcagaggtttgccgacgcaatcgcacggtccaagagatcgttcaa
gaagctttgaggccacttgagttgaatctggtctatgtatcatag

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