Cynara cardunculus var. scolymus (artichoke): 112508795
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Entry
112508795 CDS
T05604
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
ccav03013
Nucleocytoplasmic transport
ccav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112508795
03008 Ribosome biogenesis in eukaryotes
112508795
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112508795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112508795
03009 Ribosome biogenesis [BR:
ccav03009
]
112508795
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112508795
03036 Chromosome and associated proteins [BR:
ccav03036
]
112508795
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112508795
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112508795
Pre-60S particles
112508795
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112508795
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112508795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
112508795
NCBI-ProteinID:
XP_024969323
LinkDB
All DBs
Position
LG 3:complement(554503..568469)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVGLLDATVAAFYGTGSKEERTAADHILRELQNNPDMWLQVVHILSN
TQNLNTKFFALQVLEGVIKYRWNVLPVEQRDGMKNYISDVIVKLSSNEGSFRQERLYVNK
LNIILVQILKHEWPAKWRSFIPDLVTAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPSYRNLTLQCLTEVAALNFGDFYNMQYVNMYNIFMVQLQTVLPTSANIPDAYA
HGSSEEQAFIQNLALFFTSFYKFHIRVLESTQENINSLLMGLEYLTNISYVDDTEVFKVC
LDYWNSLVTELFEANHNLDNHAAAANMMGLQMPMIPGMVDGVGTQLLQRRQLYAGPMSKL
RLLMISRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQM
LKKLSKQLNGEDWTWNNLNTLCWAIGSISGSMMEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLTTLPTTIADLEPHQIHTFYESVGQMIQAESEASKRDEYLQR
LMSLPNQKWAEIIGHARGNVDFLKDQDVIRTVLNILQTNTSAATALGTYFLPQITLIFLD
MLNVYKMYSELISSGIAEGGPYASRSSYVKLLRSVKKETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKIAMIDDVPRIFEAIFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFQALILLSPEQLKLVMDSVMWAFRHTERNIAETGLNL
LLEMLKNFQNSEFCNQYFRSYFVLIVQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGS
LTEPLWDASTVPYPYPNNGMFVREYTIKLLGASFPNIPASEVAKFVNGLFESRADLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMADS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagcttagggacttaagtcagccgattgatgttggtttacttgatgct
accgttgctgccttttatggcactggatctaaagaggagaggactgccgctgatcatata
ctgcgagaattgcaaaataatccagacatgtggcttcaagtggttcacattctatcaaac
acacagaatttgaataccaagttctttgctttacaggttcttgaaggtgttatcaagtac
aggtggaatgttttgcctgttgaacagcgagatggaatgaaaaactacatatcggatgtt
attgtgaagctttcaagcaacgagggttctttccgccaagaaaggttgtatgtcaataaa
cttaacattatactagttcagattttgaaacatgaatggccagcgaagtggcgcagcttt
attcctgacctggttacagcagcaaaaactagtgaaacaatctgtgagaactgcatggct
atactgaaacttctaagtgaggaggtgtttgatttctcaaggggtgaaatgacccaacag
aagataaaagagctcaaacaatctttgaacagcgagtttcaactcattcatgagttatgc
ttatatgtgctatcagcatctcaaagaactgagctgatcagggctactctggccacattg
catgctttcctttcgtggattccattgggatatatttttgagtctccactgctggaaaca
ctcctgaaattttttcctgtgccatcatatcgtaatctgacccttcagtgcttgacagag
gttgcagcccttaactttggggatttctacaatatgcaatatgttaacatgtataacata
ttcatggtccagttgcagactgttcttccaacaagtgcgaatatacctgatgcatatgca
catggctctagtgaagaacaggcgtttattcagaatctggcattgtttttcacttcattt
tacaagtttcatattcgtgtcctggagtccacacaagaaaacatcaattcgcttttgatg
ggcctagagtatctcacaaacatttcttatgtcgatgacacagaagttttcaaggtttgc
ttggactactggaattctttagtgacggaactttttgaggcaaaccacaatctcgacaac
catgcagcagctgcaaacatgatgggactgcagatgccaatgattcctggtatggttgat
ggtgttggtacacagttgttgcaaagacggcaactctatgctggaccaatgtcaaaatta
agattgcttatgatatctcgcatggcaaagcctgaagaggttctgattgtggaagatgaa
aatgggaatatcgttcgtgaaaccttgaaggataatgatgtccttgttcagtataagatt
atgagagagacacttatctacttatcacatcttgatcatgatgatactgaaaaacagatg
ctaaagaaactgagtaaacaactcaatggtgaggattggacttggaataacttgaacaca
ctatgctgggcgataggatctatttccgggtccatgatggaagaccaggagaacaggttt
cttgttatggttatccgtgatctactgaatctgtgtgaaattacaaaagggaaggacaac
aaagctgttatcgcgagtaatataatgtatgttgtgggacaatatccgagatttttacga
gcccattggaagtttctgaagactgttgtaaacaagttatttgagttcatgcatgaaaca
catccaggagttcaggatatggcttgcgatacatttttgaagattgtacagaaatgcaag
cgcaagtttgtcatagtgcaagttggagagaatgaaccatttgtctcggaacttcttaca
actcttccaacaacaattgcagaccttgagcctcatcagatacatacgttttatgaatct
gttggtcagatgattcaagcagaatctgaggcatcaaaacgggatgagtatttgcagagg
ctgatgagtcttcccaatcagaaatgggccgagatcataggccatgcacgtggcaatgtg
gactttttgaaggatcaagatgttattaggaccgtgcttaatatattgcagacaaataca
agtgctgccactgcgcttgggacttatttcttaccacaaataaccctgatctttttggac
atgctgaatgtttataaaatgtacagtgaacttatatcatctggcattgctgaagggggg
ccctatgcttctaggagttcttatgtgaagcttctgaggtctgtgaagaaggaaaccctt
aagctcattgagactttccttgataaggctgaagatcaaccccaaatcggaaagcaattt
gtgccccctatgatggatcctgtgcttggtgactatgctcggaacttgcctgatgctaga
gaatcggaagttttgtctctattcgccacaatcataaacaagtacaaaattgcaatgata
gatgatgttccccgtatatttgaagctatttttcagtgcaccctggagatgataaccaag
aattttgaagattaccctgaacaccgactcaagtttttttcattacttcgggccattgct
acacattgctttcaagcattaatcttgttgtcacctgagcaattaaagcttgtaatggat
tctgtcatgtgggcttttcgacacactgagaggaacattgctgagaccggtcttaatctt
ttgttggagatgcttaagaactttcagaactctgagttctgtaaccaatactttcggtct
tactttgtgctgattgtgcaagaaatatttgctgtcttgaccgacacattccataaaccg
ggatttaagttgcatgtgttggtgctacaacacttattctgcttggtggaatctggttcg
ttgactgagcctttatgggatgcatccactgttccatatccgtatcctaacaacgggatg
tttgttagagagtatacgattaaacttctgggcgcctcttttcccaacattccagcatct
gaggttgcaaaatttgtgaatggactcttcgagtcaagagccgacctctctacgttcaaa
aatcacatacgggacttccttgtacagtctaaagaattttcagcacaagacaacaaggat
ctatacgcagaagaagcagctgctcagagagagagggagagacaacgaatgctaagcatt
cctggacttattgcaccaaacgagattcaagatgagatggcggactcatag
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