Cynara cardunculus var. scolymus (artichoke): 112508824
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Entry
112508824 CDS
T05604
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112508824
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
112508824
NCBI-ProteinID:
XP_024969381
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Position
LG 3:complement(3531664..3536865)
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AA seq
678 aa
AA seq
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MAGGCSIVWFRRDLRVEDNPALAAGVRAGKVIAVFIWAPEEEGHYYPGRVSRWWLKQSLA
SLDSSLKNLGTSLITKRSSDSVSSLLDVTKSTGATQIFFNHLYDPLSLVRDHRAKEVLTE
NGIAVRSFNADLLYEPWEVLDDDGRPFITFTSFWDRCLSMPYDPEPPQLPPKRIISGYSM
VLWFPSGDFSRCPSDTVAFENDSERGSNALLARAWSPGWSNANKALAAFVNGPLLDYSRN
RRKADSATTSFLSPHLHFGEVSVRKVFHLVRTKQILWANEGNNAGEESVNLFLKSIGLRE
YSRYMSFNHPYSHERPLLGHLKFFPWVIDEGYFKAWRQGRTGYPLVDAGMRELWATGWLH
DRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDN
PQIEGYTFDPNGEYVRRWLPELARLPTEWIHQPWDAPEYVLRAAGIELGSNYPLPIVKID
AAKARLREALTQMWQHEATSRAVLENGMEEGLGDSSEDALIAFPQDMQMEMDQDTVRNHT
SITIRHYEDQMVPSLTASLLRGGVEEEEESSSDHRSLANDSRAEVPDDVMDPEPARESLH
QELAQFNIQIALRNAEDSPAESSNGTTSRRERDGVVVPVWSPATSSFSEQFVGEDSSYLQ
RHPQSHQMINWRELSQTG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggatgcagtatagtatggtttaggagagatctgagggtagaagataaccct
gctttagctgcaggtgtaagagcaggtaaagtgatagcagttttcatatgggcacctgaa
gaagaaggccattattatccagggagagtatcaagatggtggcttaaacagagtttagct
tcgcttgattcatccttgaagaatcttggaacttctctcatcaccaagagatcttctgat
agtgtttcttctcttcttgatgtcaccaaatccactggtgctactcagatcttttttaac
cacttatatgatcctctatctctggttagggatcaccgagcgaaggaggttttaactgaa
aatggcatagcagtgcgctcgttcaatgcagacttgttatatgaaccatgggaagttctt
gatgatgatggtcggccgtttattacatttacatcattttgggatcgatgccttagcatg
ccgtatgatcccgagcctccacaactcccacctaaaagaataatctcaggatactcgatg
gttttatggtttccttcaggtgatttttctagatgcccttcagacacagtggcttttgaa
aacgattcagaaaggggaagcaatgcacttctagctcgggcatggtcaccaggatggagc
aatgctaacaaggcactagctgctttcgtcaacgggccattactagattactctagaaac
cgtagaaaagcagatagtgccacaacatcttttctttctccgcacctgcatttcggagaa
gttagtgtacggaaagtctttcacctagtacgaaccaaacaaatcctttgggccaatgaa
gggaacaatgctggtgaagaaagcgttaatttattcctgaaatctatcggtcttcgtgaa
tactcaagatatatgagtttcaaccatccatatagtcacgaaaggccgcttttgggacat
ttgaagtttttcccttgggtgattgatgaaggctattttaaggcatggagacaaggtaga
accggttaccctttagttgatgccggcatgagagagctttgggccaccggttggttgcat
gataggatccgagtggtggtttctagtttcttcgtgaaggttttacaactaccttggaga
tggggcatgaaatatttctgggatacgttgctagatgcggatcttgagagtgatgctctt
ggttggcagtatatatctggaactttacctgatagccgcgagtttgaccgcatagataat
cctcagattgagggctatacatttgacccgaatggggaatacgtacgaagatggcttcct
gagcttgctagattaccaactgagtggatacatcagccgtgggatgcgccagaatacgtg
cttcgagctgctggaatagagcttggttcgaattaccctcttcccatcgtaaagattgat
gcagcaaaagctcggttacgtgaagcacttacacaaatgtggcagcatgaagccacttct
agagccgttctagaaaatgggatggaagaaggtcttggtgattcgtctgaagacgctctg
atagctttcccacaagatatgcaaatggagatggatcaagatactgttaggaatcacacg
agtatcacgattcgccattatgaagatcaaatggttcctagtttgactgcatctttgtta
agaggtggagtagaagaagaagaagaatcatcttcagatcatagaagtctagcaaatgat
agcagggcagaagttcctgatgatgttatggatccagaaccagcaagggaatcacttcat
caagaacttgcacagtttaacatccagatagctctgaggaacgctgaagattctccggct
gaatcttctaacggtacgacttctaggagggaacgagatggggttgtggttcccgtgtgg
tcaccggcaacttctagtttttcagagcagtttgtaggtgaagacagttcttatttgcaa
aggcatccacagtcgcaccaaatgatcaactggagggaactttctcaaaccgggtaa
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