KEGG   Cynara cardunculus var. scolymus (artichoke): 112508830
Entry
112508830         CDS       T05604                                 
Name
(RefSeq) SAC3 family protein A-like isoform X1
  KO
K23802  SAC3 family protein LENG8/THP3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112508830
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112508830
SSDB
Motif
Pfam: SAC3_GANP CSN8_PSD8_EIF3K
Other DBs
NCBI-GeneID: 112508830
NCBI-ProteinID: XP_024969389
LinkDB
Position
LG 3:9499914..9514064
AA seq 1048 aa
MNQGVTDTITTLDPNSLEHHAVDSSHGQAPSSYPPSTSSESASWTMYGAVNEATGSKTYP
STSFNHDQHSEPHPRNIQDGETAASAGTVSSSGTASLEYANYAAYPNSDPYGYGSTGYAG
YYSSYQQQPTQSYPQQQPTQSYPQQQPTQSYPQQQPTQSYPQQQANQSYAQQQPNQTYAQ
PAGAYQSTGAPHQPISSFQNTGSYAGPASYSTTYYNPGDYQTSGGYPSANYNSQTNSWNQ
GSYASYGHQYPNYSAESNMAYSAQNAPAAPLQYQPDYKQQWTDYYSQTEVTCAPGTENLS
STSASNLVSPLPAVASGYSALSSQHLPSTAPSSWRPEPGLSELSSVQPSAAINNVQEGYW
KHGGQGLQNYHVSSAQSNFQKPLDSNPIPGSFQDQRKPEVPQRPIVQYSASHQVAQTYQS
SPQTAIPFDSGRVSKMQIPTNPRISSNLPVSLPKNDNAAIGGVTKPAYISVSLPKTNENA
SSHVAADSAFKPGMLPKSLRGYVERALARCKDDRQMAACQDVLKEVITKASTDGTLCTLD
WDTEPLFPLPNTNAINNDTLNNSIPPSSPMKNRRSPSRRTKSRWEPLPEEKPVDKQASFT
PNSVKYSGGIQNHERDKQFPTGQPENKDNKFSHLKFYISNQKETNKAVFRPAKRQHIGDG
RSGSNNGDSSSDSDKEQSLTAYYAGAITLADSPEERKRRESRSKRFEKTHGNRAAYNPTR
TKNVGAGNLYTRRASASVLANSNSSSDGASRAVEDIDWDSLTVKGTCQEIEKRYLRLTSA
PDPATVRPEEVLEKALLLVQDSQKNYLYKCDQLKSIRQDLTVQRIRNELTVKVYETHARL
AIEVGDLSEINQCQSQLQTLYAEGIKGCHMEFSAYNLLCVILHSNNNRDLLSAMSRLSIE
ARKDAAVKHALAVRAAVTSGNYVSFFRLYKIAPNLNTCLMDLYIEKMRYAALKCITRSYR
PTLPVSYVAQVLGFPSAEVSDEKDTGGLEECTEWLKAHGACLATDNTGEMMLDAKASMAS
LFMPEPDDAVAHGDASLAVNDFLTRSLS
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgaatcaaggcgttactgacaccataaccacactggacccgaattcacttgagcatcat
gctgttgattcgagccatggacaagcaccatcaagttatcccccatctaccagctctgag
tccgcatcctggacgatgtacggagctgttaacgaagccacaggcagcaaaacttatccc
agtaccagctttaaccatgatcaacattcagaaccccacccaagaaacattcaagatgga
gagactgcggcatctgctggcactgtgtcaagttctggaacagctagtctagagtatgcc
aactatgcagcatacccgaacagtgatccatatggatacggaagcacaggatatgcaggt
tactatagtagctatcagcagcagccaactcaatcatatcctcagcagcaaccaactcaa
tcatatcctcagcagcagccaactcaatcatatcctcagcagcagccaactcaatcatat
cctcagcagcaggcaaatcaatcatatgctcagcagcaacctaatcaaacatatgctcag
cctgcaggagcctatcaaagcacaggtgctcctcatcagcctatttcctcatttcagaat
acaggttcctatgctggacctgccagttattcaaccacttattacaatcctggtgattat
cagacatctggtggttacccaagtgcgaattacaatagtcagacaaactcgtggaatcaa
ggaagctatgcaagttatggtcatcaatatccaaactactctgcagaatctaacatggct
tatagtgctcaaaatgctcctgcagcacccctccaatatcaaccggattataaacaacaa
tggacagactattacagccaaacggaagtgacctgtgctcctgggactgaaaatttatct
tctaccagtgcatccaatctggtatctcctcttcctgctgttgctagtgggtattctgct
ctaagcagccagcatctgccatctactgctccatcctcttggaggccagaacctggctta
tctgagctgtcctcagtgcagcctagtgcagcaattaacaatgttcaagaaggatactgg
aagcatgggggtcaaggtttgcaaaattatcatgttagttccgcgcaatcgaactttcag
aagcctttggattcaaatcctattcctggaagcttccaggatcaacgaaagcctgaagtc
cctcaacgaccaattgtgcaatattcagcttctcatcaggttgcacagacttatcaatca
tctccgcaaactgcaataccctttgattcaggcagggtgagcaaaatgcagattccaaca
aaccctagaatctcgtcaaatttgcctgtgagtttgcccaagaatgacaatgctgcaatt
ggtggagtgaccaagccagcttatatcagtgtctcacttccaaagactaatgaaaatgcg
tcatcgcatgttgctgcagattctgcgtttaagcctggtatgcttcccaagtcactgcgt
ggatatgtggaaagggctttggctcgttgcaaggatgatagacagatggcagcttgtcaa
gatgtccttaaggaggttattaccaaggcaagtactgatggtactctttgtaccctagac
tgggatacggagcctcttttcccacttcccaataccaatgcgattaataacgatactttg
aataattcaattcctccatcatcaccgatgaagaacagaagaagtccaagcaggcgtacc
aaaagtaggtgggagcctttaccagaggagaaaccagttgataaacaagcatcttttact
cccaatagtgtaaaatacagtggaggcattcaaaaccacgaaagggataagcagtttcca
acaggacaaccggagaacaaggataataaatttagtcaccttaaattttatatatcaaat
cagaaagaaacaaataaagcggtttttaggcctgctaagaggcaacacattggtgacggt
cggagtggatccaataacggtgactcatccagtgatagtgataaagaacaaagcctgacg
gcatattacgctggtgcgattacacttgcggattcacctgaggaaaggaagagacgtgaa
agtcgttcaaagcgttttgaaaagactcatggcaatcgagcagcatataatcctacgaga
accaaaaatgttggagctggaaacttgtacactagaagggcatctgcgtctgtgttggca
aatagtaacagttccagtgatggtgccagcagggcggttgaagatatcgactgggattct
cttactgtcaaaggaacttgccaagaaattgagaaacgctacttacgcctcacttctgca
cccgatcctgccactgtaagaccggaagaagtattagaaaaagctttgcttctggttcaa
gattcccaaaagaactacctatataaatgtgaccagctaaaatctattcggcaagatctt
acagtacaacggatacgcaatgagttgactgtcaaggtctatgaaactcatgcacgatta
gcaatagaagttggagacttgtccgaaatcaatcagtgccaatcacaattgcaaacgctc
tatgccgaaggaatcaaggggtgccatatggaattttctgcatacaatttactttgtgtt
atcttgcactctaataacaacagagatctcttgtcagcaatgtctaggttatcgattgaa
gcaagaaaagatgcagcggtaaaacatgctcttgcagtccgtgcagccgtcacctctgga
aactatgtctcgttcttcagattatacaagattgctcctaacctgaatacctgccttatg
gatctttatatcgagaaaatgaggtatgcagctctgaaatgcataactcgttcatatcgt
cccacgcttccagtatcatatgtggctcaggtccttggctttccgtcagctgaagtgtcg
gatgaaaaagatacaggaggattggaggagtgcacggagtggttgaaggctcatggtgca
tgccttgccaccgataatactggagagatgatgcttgatgccaaggcttccatggcttct
ctgttcatgccagagccagacgacgcagtggcccatggagatgccagtcttgccgttaat
gattttttgactcgttctttatcatag

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