Cynara cardunculus var. scolymus (artichoke): 112508859
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Entry
112508859 CDS
T05604
Name
(RefSeq) ribonuclease TUDOR 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
112508859
NCBI-ProteinID:
XP_024969430
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All DBs
Position
LG 3:complement(36561805..36571809)
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AA seq
983 aa
AA seq
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MAQAAGNSGWLRGKVKAVLSGDTLVIMGFTKAEIPPEKTVVLAHLSAPRLARRGGQDDPF
AWESREYLRKLCIGKDVVFRTEYTIPNFSREFCSVFIGTTNVGNEVVTHGWAKVKEAKGE
VTPEHTELLRLEEQARQQGVGLWDRSPGSVEAAIRNLPPSAVGDPSNLDAMGLLATNKGK
PMEAIVEQVRDGSSLRVYLLPGFQFVQVFVAGIQSPSMGRRTTQESTIVTEVPSDEPNGE
ANAESRGPLTSAQRVTASSTYNEVAADPYGREAKHFTEIRVLNRDVRIVLEGVDKFSNLI
GSVYYSDGESAKDLAMELIENGYAKYVEWSASMMEDEARRKLKAAELQAKKTKLRLWTNY
VPPATNSKAISDNFTGKVVEVVSGDCIIVADDSLPFGSPAAERRVNLSSIRCPKLGNPRR
EEKPAPYAREAREFLRTRLIGRQVQVSMEYSRKVPLADGSAAPAGPADSRVMGFGSVFLL
SQGKESEDVSAAPPTAVTQQPGVNVAELVIARGFGTVIRHRDFEERSNYYENLLAAETRA
TAGKKGIHSAKDPPVMHIMDLLTASAKKAKDFLPFLQRNRRMTAVVEYVLSGHRFKLFVP
KETCSIAFSFSGVRCPGRDEPYSNEAISLMRRKIMQRDVEIEVETVDRTGTFLGSLWESK
SNVAIILLEAGLARLQTFGADRIPDAHLLAQAEQSAKKQKLKIWENYVEGEEVTNGAAPD
RKQKEEFKAVVTEVLGGGKFYVQNVADQKVASIQQQLASLNLKEAPVLGAFNPKKGDIVL
AQFSADNSWNRAMVVSAPRGVVQSTKDRFEVFYIDYGNQEAVTYTQLRPLDASVSSAPGL
AQLCQLAYLKVPTLEEDYGQEAAMLLSESTLNGPKEFRAVIEERDTSGGKVKGQGTGTII
LVTLIDEEADTSVNAMMLKGGLARLEKRRRWEPKDRQAVLDELEKHQTEARTKRLGMWEY
GDIQSDDDENPLPAKKTGAAGKR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcagctggaaattcaggatggctgagaggaaaagtaaaagctgttttgtct
ggtgacaccttggtgattatgggatttaccaaagctgaaatcccccctgaaaagactgtc
gttttagctcatctttccgctccaagattagcacggagaggtggccaggatgacccattt
gcatgggaaagcagagaatatctacggaagctgtgtataggaaaggatgttgtttttaga
acggaatataccattccaaatttctcccgagaattctgcagtgttttcattggcactaca
aatgttgggaacgaggttgtcactcacggctgggctaaggttaaggaggctaaaggagag
gtgactcctgagcatactgaattgctacgccttgaagaacaagccagacaacagggagta
ggtttatgggacaggtctccgggttctgttgaggcagctatcaggaacctcccaccatct
gctgttggtgatcccagcaatctggatgcgatggggcttttagctacaaacaaaggcaaa
cccatggaagctattgtagagcaagttcgtgatgggagctcacttcgtgtttatttgctt
ccggggtttcagtttgtccaagtatttgttgctggaatccagtccccatcgatgggaaga
aggacaacacaagaatctactatagtaactgaagtaccatccgatgaaccaaatggagaa
gctaatgcggagtctcgtggccccttgacatcagcccagagagttactgcctcatcaacc
tacaatgaagttgccgcagacccctatgggagggaagctaaacatttcactgagattcgt
gtgctaaacagagatgtccgcattgttctcgagggtgttgacaagttcagcaatttgatt
ggttctgtctattactccgatggtgaatcagcaaaggacctggcaatggagcttattgaa
aatggatatgctaaatatgtcgagtggagtgcaagtatgatggaagatgaagccaggagg
aagttgaaggctgcagaacttcaagcaaagaagaccaagttgaggctttggacaaactat
gtacccccagccactaattcaaaggcgatatcagacaatttcactggaaaggtagtagaa
gttgttagtggggactgcatcattgttgcggatgattctcttccattcggcagtccagca
gctgagcgacgagtcaatctctcaagtatcaggtgccccaaactgggaaatccacggaga
gaggagaaacctgctccttatgcccgtgaagcaagggaatttctgagaacaagattaatt
ggccgtcaagttcaagtttcaatggaatactctcggaaggtcccccttgccgatggatct
gctgccccagctgggccagcagattcaagggtaatgggctttggatcagtcttcctcttg
tctcaagggaaggaaagtgaagatgtctctgctgctccccctacagcagtcactcagcag
cctggtgtgaatgttgctgaactcgttattgctcgtgggtttggcactgtcattagacat
agagactttgaggaaagatcaaattactacgagaatcttcttgcagctgaaactcgtgct
actgctggaaagaagggaattcattctgctaaagaccctcctgttatgcacattatggat
ctcttgacggcctcggccaagaaagccaaagatttcctcccgtttctgcaacgaaacagg
aggatgactgctgttgttgaatacgtccttagtggtcacagatttaaactatttgtccct
aaagaaacatgcagcatcgctttctcattttctggggtcagatgccctggacgtgatgag
ccttactccaatgaagcaatttcacttatgagacggaagataatgcagagggatgtagag
attgaagtggaaacagttgatagaactggtaccttcttgggctctttgtgggaatcaaaa
tctaatgtggcaatcattcttctggaagctggacttgcaagacttcagacgtttggcgct
gataggattccagatgctcatcttcttgctcaagccgagcagtctgccaagaagcagaaa
ttgaagatatgggaaaactatgtggaaggagaggaagttactaatggtgcagctcctgat
agaaaacagaaagaagaattcaaggccgtggtgactgaagtccttggcggaggcaaattc
tatgttcagaatgttgcagatcagaaagttgcttccatccagcaacaacttgcttcttta
aacctcaaagaagcacccgtgcttggtgcatttaacccaaagaagggcgatattgttctc
gctcagtttagtgcagataactcttggaaccgagccatggtcgtaagcgctccacgtggt
gtcgttcaatcgactaaagacagattcgaagtcttttacatcgattatggaaatcaagaa
gctgttacatatacccagttgcgtccactggatgcatcggtatcgtctgcacctgggctg
gctcaactttgccaacttgcttacttaaaggtaccgactttggaggaggattacggtcag
gaagcagccatgcttctaagcgaaagcacacttaacgggccaaaggaattcagggcagtg
attgaggagagggatacttctggaggaaaagtgaaagggcaaggaaccggaactattatt
ttggtaactttgattgatgaggaagccgatacgagtgttaacgccatgatgctgaaggga
ggactagcaaggttggagaaaaggaggagatgggagcctaaagaccgacaagctgtgctg
gatgaattagaaaagcatcagacagaagcgcgtaccaaaagattgggaatgtgggagtat
ggtgatatccagtctgatgacgatgagaaccctctgcctgctaagaaaacaggtgctgct
ggcaaacgttaa
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