Cynara cardunculus var. scolymus (artichoke): 112508871
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Entry
112508871 CDS
T05604
Name
(RefSeq) 3beta-hydroxysteroid- dehydrogenase/decarboxylase-like
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00100
Steroid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112508871
Enzymes [BR:
ccav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
112508871
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Motif
Pfam:
3Beta_HSD
Epimerase
Reticulon
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
Polysacc_synt_2
NmrA
DUF7819
DUF2368
S_4TM
Motif
Other DBs
NCBI-GeneID:
112508871
NCBI-ProteinID:
XP_024969446
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Position
LG 3:4187905..4202399
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AA seq
564 aa
AA seq
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MSAPQERWCVVTGGRGFAARHLVDMLIRYEIYSVRIADLAPDIKLETHEEKGNLGQALRL
GRAQYVSMDLCDKSQVNKACEGAEVVFHMAAPDSSINNYKLHYAVNVQGTKNVIDACTKL
NVKRLIYTSSPSVVFDGVHGIYNGDESLPYAAKHNDSYSETKAEGEALVIKANGINGLLT
CCIRPSSIFGPGDKLLVPSLVAAARAGKSKFIIGDGTNMYDFTYVENVAHAHVCAERALA
SDGSASKRAAGEAYFVTNMEPIKFWEFMSLILVGLGYERPRIKIPAAVMMPIAHLVERTY
NILAPYGMKVPQLTPSRIRLLTCNRTFNSGKANDRLGYIPIVPLQEGLKRTIESYPDLRA
ELLPRKEGPSKAAVYLGNGIVADILLWRDTKLTFTGMLALIVFYVSFVLPGSTMITAVSK
VLMWASILIFIHGKLPNHLMGYSVEKIPESKFQCSEEMSRRTALSVASSWNCAVNNLKSI
SSGHDWTLFFKMAISLFIVSCIGSMSLQSFFLKVVPFSFVVFYIYDQYEDEVDRIVQTVI
PIERLSNPDFLRLLNPFKPLDKQH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccacaagagaggtggtgtgttgtcactggaggaagaggctttgctgcacgg
catttagttgatatgctgatcaggtatgaaatatattctgttcggattgctgatttggct
cctgatattaagctcgaaacccatgaggaaaagggaaatcttggtcaagctttacgatta
ggccgtgctcaatacgtatctatggatctctgtgacaaatctcaagtaaacaaagcttgt
gaaggggccgaagttgtttttcatatggctgcaccagattcatccattaataactacaag
ctgcattatgcagtcaatgtgcaaggcaccaagaacgtaattgatgcttgtaccaagctc
aacgtgaagaggcttatctatactagttctcctagtgtggtttttgatggggtgcatgga
atatataatggagatgaatcattgccatatgctgctaagcataacgattcatattctgaa
actaaagctgagggagaggcattagttatcaaggctaatggcatcaatggacttctgaca
tgctgcatccgtcctagcagcatttttggacctggtgataagttgcttgttccatctttg
gttgctgcagcaagggcagggaaatcgaagtttattattggggacggcacaaacatgtat
gatttcacctatgttgaaaatgtggcacatgctcatgtatgtgctgaaagagctctagca
tcagatggatctgcatcaaagagagctgcaggcgaggcttactttgtaaccaatatggag
ccgatcaagttttgggagttcatgtcacttattcttgtaggccttggctatgaaaggcca
agaatcaagattcctgctgctgtcatgatgcctattgcacatttggtggagcgtacttat
aacatattagccccatatgggatgaaggtaccacagttgacgccttcaagaataagactt
ctgacttgcaacagaacatttaattctggaaaggcaaatgatcgtcttggctatatacca
attgtgccccttcaggagggtctcaaaaggactattgaatcatacccagatcttagggct
gagcttttgcctagaaaggaagggccttctaaagctgctgtatatcttggaaacggaatc
gttgcggacatacttctttggagagatacaaagctgacgttcaccgggatgctcgctttg
attgtattttacgtcagttttgtattacctggaagtaccatgataactgcagtttccaag
gtcctcatgtgggcgtcaatccttatattcattcatggaaaattgcccaatcatttaatg
ggatattcagtcgagaaaattccggaatcaaagtttcagtgctcggaagaaatgtcccgc
agaactgctctatcagtggcttcatcgtggaattgtgcagtaaacaatttaaaatctatt
tccagtgggcatgactggacgctattcttcaagatggctatatctctctttattgtaagc
tgcattggatccatgtccctgcaaagcttttttctaaaagtcgttccctttagctttgtt
gtgttctacatttacgatcaatatgaagacgaagtggacaggattgttcaaacagttatc
ccaatcgaacgcttatcaaatcccgacttcttaagattattgaatcccttcaagccgctt
gacaaacagcattag
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