Cynara cardunculus var. scolymus (artichoke): 112508927
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Entry
112508927 CDS
T05604
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112508927
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
112508927
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
112508927
Prokaryotic type
112508927
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
112508927
NCBI-ProteinID:
XP_024969551
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Position
LG_3
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AA seq
980 aa
AA seq
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MPQITNLRLLFSSAANHPNPSSFLSSFKPNSFFKFNTKIPTKLNKSISFSYPFFTCLSSS
SSSSSSSSRKSHRYNSKSFNSNRRISSSNSKQSDMREKRGLSSMKMGDEVEETKKMDMAA
GFNKKRAEGRDKSSRPKDLKLKVRRLNPVNTISYVQVLGTGMDTQDTSPSVLLFFDKQRF
IFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGTGEEGISVNVWGP
SDFKYLVDAMKSFIPNAAMVHTRCFGPSPKSDKIPLDNLEKLNDQLKLIDDEVVKISAIL
LRPSSSETNGLKKDEFALKSSDISVLYICELPEIRGKFDPEKARALGLRPGPKYRELQEG
VSVKSDTKNIMVHPDDVLGPSVPGPIVLLVDCPTLSHFQELLSSSSLETYYADVASMPDE
NHKTVNCVIHLSPALVVNSNDYQKWMSRFGGAEHILAGHQMKNIEIPILQSSARVAARLN
YLCPQFFPAPGFWSLQQLRCSPSPVINEGTGLKLCETISAENLLKFHLRPYAQLGLDRSG
IPATAASHAIIEELLSEIPEISDAAQQVARLWQKNVDAREAASDENMIEEPWLNQNYLPS
CLEGITRENVEIVLLGTGSSQPSKYRNVSSVFINLFSKGSLLLDCGEGTLGQLKRRFGIQ
GADDAVKGLRFIWISHIHADHHTGLARILALRRDLLKGVPHEPLVVIGPRQLKRFLDAYE
RLEELDMQFLDCRHTTKASLAAFESNYNQSDNSEPLNGNKIDSINPKVSDSSLFSKGSQM
QSHWKRPGSPVDGNLAYPIIKNLTDVLNEAGLESVISFPVVHCPQAFGVVLKGVDRLHGD
GRRIVPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDALVEEAIARNHSTTKEAIEV
GDAAGAYRIILTHFSQRYPKIPVFDEGHMHKTCIAFDMMSINFADLHVLPRVLPYLKLLF
KNEMVVDEYEDLEDVVTLAA
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaataacaaaccttcgcctccttttctcctccgctgcaaaccaccctaatccc
tcttcttttctctcttctttcaaacccaattctttctttaaattcaacaccaaaataccc
actaaacttaataagtccatctctttttcttaccctttcttcacttgtctttcatcttcg
tcatcatcatcatcatcatcatcaaggaaatcacacagatacaattcgaagtcttttaat
tcgaatcgaagaatcagtagcagtaacagcaagcagagtgatatgagggagaaaagaggg
ttatcatcgatgaagatgggagatgaagtggaagaaaccaagaagatggatatggctgct
gggtttaacaagaaaagggcagagggtagagataagagtagcaggcctaaagatcttaag
ttaaaagtcagaaggcttaatcctgttaatacaatttcttatgttcaggttttaggaacc
ggtatggatactcaagacacatcgccgtcagtcttgctcttctttgacaaacagcgattt
atatttaatgctggagaagggctgcaacgattttgtacagaacataagattaagttgtca
aagattgatcacatatttctttcacgtgtctgctcagaaacagctggtggactaccaggt
cttctattgacgttggctggcactggtgaagaaggaatatcggtaaatgtatgggggccc
tcagattttaagtatttagtcgatgcaatgaaatctttcattccaaatgcagccatggtt
catacacgatgttttggtccatcgcccaaatctgataagattccgttggacaatcttgaa
aagcttaatgaccaactcaaacttattgatgatgaagttgtcaaaatatctgctattttg
ttgcggccaagcagttctgaaactaatggtctcaagaaagacgagtttgcattaaagtct
agcgatatttccgttttatatatttgtgagttgcccgagattaggggtaaatttgaccct
gaaaaggccagagcacttggattgagacctgggccaaaatatcgagaattacaagaggga
gtttctgtgaaatcagatacgaagaatatcatggttcatccagatgacgtccttggacca
tcggttcccgggcctattgttctccttgtagattgccctactttatctcattttcaagaa
ttgttatcttcatcgtctctcgagacttactatgctgacgtggctagtatgccagacgag
aatcacaaaaccgtcaattgtgtaattcacttaagtccggcattagttgtaaactccaat
gattatcaaaaatggatgtcaagattcggtggggcagagcatattctggcagggcatcaa
atgaagaatattgagataccgattctgcaatccagtgcaagagttgcagctcggcttaac
tacttatgtcctcagttcttcccagctccgggtttttggtctcttcaacaactgaggtgt
tcaccctcacccgtcataaatgagggcactggtttaaagctttgtgagaccatttctgcc
gaaaatcttctcaagttccatttgcgtccgtatgcacagctcggattagaccgatctggt
attccggccacggcagcatcccatgcaattatcgaagagcttctttccgagattccagaa
atatcggatgccgcccaacaagttgctcgcctttggcaaaagaacgtagatgcaagagag
gcggcaagtgatgaaaacatgatcgaagaaccttggttaaatcaaaattatcttcctagc
tgtttggagggcatcacaagagaaaatgtcgagattgtccttctaggaacgggttcatct
caaccttccaaatatcgaaatgttagttccgtcttcatcaatcttttctccaaaggtagt
ttactattagattgtggagaaggaacattgggacagctgaaaagaagattcggcattcaa
ggcgcagatgatgccgttaaaggtttaagatttatttggatttcacatatccatgccgat
caccatacgggtttagcaagaatactggctcttagacgcgatttgcttaagggggtccca
cacgaaccattggttgttattggccctagacagctgaaaagattcctagatgcgtacgaa
agacttgaagagttagatatgcagtttcttgattgtagacatacaacaaaagcttcgtta
gcggcttttgagtcgaactataatcagtcggataattccgaacccttgaatggcaacaaa
attgattccataaatccgaaagtttctgattctagtttgttttctaaaggaagtcagatg
cagagccattggaaaaggccgggtagtccggtggacggtaatctagcgtacccgattatc
aaaaacttgacagatgtgcttaacgaagcaggtttagaatcggtgattagttttccggtt
gtgcattgcccacaagcttttggtgttgttttgaaaggtgttgatagattacatggtgac
ggtagaagaattgtacccgggtggaagattgtttattctggtgacactcggccttgtccg
gaattagtcgaagcgtctcgaggagcaacggttctcatacacgaggcaacttttgaggat
gctttggtggaggaggcaatagcaagaaatcacagcacgacgaaagaagccattgaagta
ggggatgccgcaggagcttatcgcataatccttacgcatttcagtcaacgataccctaaa
attccagtatttgatgaaggtcacatgcataaaacatgcattgctttcgatatgatgagc
atcaactttgccgacttacacgtgcttccaagggtacttccgtacctaaaattgctgttt
aagaatgaaatggttgtcgatgaatacgaggatcttgaggatgttgttactttagctgct
tga
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