Cynara cardunculus var. scolymus (artichoke): 112509048
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Entry
112509048 CDS
T05604
Name
(RefSeq) putative receptor-like protein kinase At3g47110
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
LRR_14
LRRNT_2
LRR_LRWD1
LRR_ComC
LRR_Zer-1
LRR_At5g56370
ABC1
TM_ErbB1
SKG6
Motif
Other DBs
NCBI-GeneID:
112509048
NCBI-ProteinID:
XP_024969693
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Position
LG 3:complement(23536577..23539642)
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AA seq
990 aa
AA seq
DB search
MDLITLFHMPIFFLFISNPCVSSATLRNIDTDIQVLISIKSQIITQPSDALATWDQNSTS
PCNWTRVVCGDHGRRVVALDLSNLHITGLVSPYIGNLSFLRSLQLQDNHFQGKLPETITN
LFRLRLLNISSNSIQGTIPANISRCLQLRVLDFMQNQISGSIPEDLTLLPNLQALNLAKN
RLSGSIPPSIANLSSLSTLNLGTNTLSGPIPGDLSRLRNLKNLDLTINNLTGTVPLSIYN
MSSLESLALASNDLWGDIPYNVGDTLPNLLVFNFCINRFTGTIPGSLHNLTNIRIIRMAH
NRLHGTVPPGLGNLPELEMYNIGYNNIVSSRGEGLGFLNSLVNSTKLDFLAIDGNHFDGV
IPESIGNLSKQLRILFMGSNQVSGGIPPSIGQLKGLGLINVSYNSLSGEIPPELGQLEDL
QELVLSKNRLSSNIPNSLGNLGNLTKIDLSNNELGGSIPISFRNFTRIISIDLSMNKLSG
SIPTEVLDLPSLTTILNLSSNSLTGSLPREIELLERVVTVDLSDNHLSGNIPNSIQNCKS
LEQLILSENSLSGNIPSSLGELKGLAFLDLSSNLLSGSIPLELQNLKALQFLNLSFNNLE
GKVPSDGVFSNLSRVHLEGNPKLCLDAGCRGGGSHKAVVISVAVIVSVLVMLLSIVLFFY
FRRNNATIIDTPYSFKGQHHMITYDQLRLATGNFNEENLLGRGSFGSVYKGCLNLEGRSH
EIAVKALDMEITGSLPSFVAECTALRHLRHRNLVKLITSCSSLNHKNTEFLALVYEYMKN
GSLENRIGNGMRLLEGLKVAIDVACGLTYLHHESAVAPVVHCDIKPSNVLLDEDLTGKIG
DFGLASMLVEKDQSISSAHVLKGSMGYIPPEYGVGAKPSTKGDVYSYGIMVMEIFTGKSP
THESFVGGLSLKTWVQSAFPTNLDRVLDPDMLQELEDGQSMNMKIQLDCLKTVIGVALSC
TNESAEGRITISEALCKLKSVHDMCHKSNV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggacctaattaccctattccatatgcccatcttctttcttttcatatcaaacccttgc
gtatcttctgccaccttaaggaatattgatacagatatacaagtcttgatctccatcaaa
tctcaaataattacccaaccctcagatgctttagctacgtgggatcaaaactctacctct
ccatgcaactggactcgagtcgtgtgtggtgatcatggtcgtagagtcgtcgctcttgac
ctctccaaccttcacataactggtctagttagcccctatatcgggaacctatcctttctc
agatcacttcaactccaagataatcactttcaaggaaaacttcctgaaaccatcaccaat
ctttttcgcttgcgactgctcaatatcagctccaacagcatccagggcaccatcccagca
aacataagtagatgcctccagctcagggttcttgatttcatgcaaaatcagatttctggt
tctattcctgaagacctcactctccttcctaatcttcaagctctgaacctggcaaagaac
cgtctttctggttctattccaccctccattgctaacctttcttcactctccactttgaac
ttgggcaccaatacacttagtggccccattcctggtgacttgtctcgtcttcggaaccta
aagaatcttgatctcaccatcaacaaccttactggcacagttcctctatccatttacaac
atgtcttcacttgagtctctagccctggcatcaaacgatttgtggggtgatataccttac
aacgtaggtgacacgctcccaaatcttctagttttcaacttttgcatcaatagattcaca
ggcactattcctggttcgctgcacaacctcacaaacatacgaatcattcgaatggcacat
aaccgattgcatgggactgtaccaccaggactagggaacctccctgagctagaaatgtat
aatattgggtacaataatatcgttagctcacggggtgagggactcggtttcttaaactct
ttggtaaacagcacaaagcttgatttcctagcaattgatggtaatcattttgatggtgtc
attcccgagtccataggcaatctttcaaaacaacttagaatcctgttcatgggttcgaac
caggtctctggcggcatcccaccctccattggtcaactgaaaggcctaggcttaataaat
gtaagctacaactccctctccggtgaaatcccgcctgagttaggccaattggaggactta
caggagcttgttctaagcaaaaatagattgtcttcaaatatcccaaattcattgggtaat
cttggaaacttgactaaaattgatttgtcaaacaatgaactgggaggaagcatacccatc
agttttaggaatttcacaaggataatttccatagatttgtccatgaataagctcagtggg
agcatacccacagaagttcttgatctcccaagtttaaccaccatccttaatctttccagc
aattcattaacaggctctttgcctcgagaaatcgagcttctggaaagagtggtgacggtc
gatctctccgacaaccatttgtctggcaacattccaaattcaatccagaattgtaagagc
ttggagcagcttatcctctctgaaaattctctatcaggcaatattcctagcagtttgggt
gaattaaaaggtttggcatttctcgatctctcttccaatttgctctccggttcaatccct
cttgagcttcagaacttgaaagcgctccagttcttgaacctttctttcaacaacttggaa
gggaaagttcctagtgatggggttttctcaaatctctccagagttcatcttgaaggcaac
ccaaagctatgccttgatgccggatgcagaggaggtggaagccacaaagcagttgtgatc
tccgttgcagtaattgtttcggttttagtgatgcttctgtcaatcgttttgtttttctac
ttccggagaaacaatgctactatcatagacactccttattccttcaagggccagcatcat
atgataacatatgaccaactacgtttggcaacagggaacttcaacgaagaaaacctgctt
ggacgtgggagttttgggtctgtttacaaagggtgtttaaatcttgaaggacgaagccat
gaaatcgctgtcaaggctcttgatatggaaattaccggttcattgcctagcttcgtggct
gaatgcaccgcgttgcgacatctcaggcacagaaatctcgtcaagctgattacatcttgc
tccagtttgaatcacaagaacacggaatttctagcactggtgtatgaatacatgaagaat
gggagtttggagaatcgtattgggaatggaatgaggttgctggaagggttaaaggtggcg
attgatgtagcttgtgggttgacttatctgcaccatgaatctgcggtggctcctgtggtg
cactgtgatataaagccaagcaatgttctgctggatgaagatttaactggcaaaatcgga
gattttgggcttgctagcatgttggtcgagaaagatcaatcaatcagctctgcccatgtt
cttaaaggttccatgggttacatacctccagaatatggtgtgggtgcaaaaccatctacc
aaaggagatgtttacagttatggaattatggtgatggagatttttactggtaagagcccg
acacatgagagcttcgtgggcggtctaagcctaaagacatgggtgcaatctgcttttccg
actaacttggatcgagtgttggatcctgatatgctacaagaactagaagatggtcaatcc
atgaacatgaagatacaacttgattgcctcaaaacggtaatcggggttgcactttcttgc
accaacgaatctgcggaaggacgaatcaccataagtgaggctctttgcaaactcaaaagt
gttcatgatatgtgtcacaagtccaacgtgtga
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