Cynara cardunculus var. scolymus (artichoke): 112509050
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Entry
112509050 CDS
T05604
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112509050
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
112509050
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GFIT
Motif
Pfam:
SRF-TF
K-box
Dynamin_N
LUC7
AviRa
MMR_HSR1
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
112509050
NCBI-ProteinID:
XP_024969696
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Position
LG 1:11436349..11453511
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AA seq
197 aa
AA seq
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MGRGKVELKRIEDKSSRQVSFSKRRNGLMKKTHELAVLCDVDVALFIFSGRGRLYEFSTG
ESMIKLLTRYQSYKKTEELTRISVHKQKLDSENVCSADELTQILKWHLEENNIQLLDTTG
LNQLEQQLDSLLQQVRIRKTQQMMEVVKALQEEEMQLKKERNFMMEEIMAARSDGIDDDS
GDPSQPQRPVMDAQIIW
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagggaaggtcgaactgaagcggatcgaagacaagagtagccggcaagtctcc
ttctccaaacgccggaatggattgatgaagaagactcatgagttggcggtgttgtgcgac
gtggacgtcgctcttttcatcttttcaggcagaggaagactctatgagttctcaaccggt
gaaagcatgattaagcttctcacccgctaccaaagctataagaagacagaggaacttacc
cgcataagcgtgcacaagcagaagcttgattctgaaaatgtctgtagcgctgatgagctg
acacagatactcaaatggcacctcgaagagaacaatattcaactgctagatacaaccggt
ctcaatcagctggagcagcaattggatagccttctccaacaagtcagaatcaggaagacg
caacaaatgatggaagttgtgaaggctctgcaagaggaggaaatgcaactgaagaaagaa
agaaattttatgatggaggagattatggcagcaaggtcggatgggatcgacgacgactct
ggtgatccctcacagccacaacgtccggtgatggacgctcagattatctggtga
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