Cynara cardunculus var. scolymus (artichoke): 112509188
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Entry
112509188 CDS
T05604
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112509188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112509188
04147 Exosome [BR:
ccav04147
]
112509188
04090 CD molecules [BR:
ccav04090
]
112509188
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112509188
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112509188
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112509188
CD molecules [BR:
ccav04090
]
Proteins
112509188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
AAA_15
AAA_30
G-alpha
MMR_HSR1
AAA_25
AflR
Motif
Other DBs
NCBI-GeneID:
112509188
NCBI-ProteinID:
XP_024969810
LinkDB
All DBs
Position
LG 3:34633586..34639053
Genome browser
AA seq
1250 aa
AA seq
DB search
MEKDNVSSSKPESSEKRRMPPGLLGTIAEHADWVDIVLMTLGTAGCIANGLSMSLIMLVL
SRMTNSYASMASINPADINQYALTYMYVAIVVGSGAFIEGFCWGHTAERQSSRMRIKYLK
AVLRQEIGYFDNTLEASRVVTNISTDISINIQGVLSEKIPDFIANLWMFATAELTAMYLC
WRLAIVALPAMFVLILPGVVYGTLLAKNEEKLQEAYAVAGGIAEQAFSSIKTVHSYAGEE
RMVNRFSTALGPTLTLGIKQGLLKGMAFGSIGIIFAIFALMSWYGSILVIEKGIKGGDIL
SAGVCIVYGGFGLGASLMNIKHFAEAKISAALVSKMIDRVPSIDSTDEQGETISAVKGEL
EFRDIDFAYPSRPESLVLKKFNLKLKAYQTVGLVGHSGSGKSTVINLLERFYDPTEGGIL
LDGISIKSLQLKWLRSQLGLVSQEPILFATSIKENIIFGKEGATDEEIVEAAKKSNAHNF
ITQLPNGYNTLVGELGTQMSGGQKQRISIARALLREPKILLLDEATSSLDSHSEKAVQEA
LTHASVGRTTIVIAHCLYAIRHADLIVVIKSGEVIESGSHDELTRNTCGSYSIMVSQLKT
MVVDGKTQPPSEGIGVKILESPGRDATTMAEETINGQKLTGSHLKEVKNQQSDEEYIRPS
WWHLMQMTAPEWKSTLMGSIGALISGSVQPLIALFQAAMLSIFFLKDHDEIRSQTRTLCY
AFIAISASAIIASVIQHYFFGVMGETLTKKIRLAMFERIMSFEIEWFDQENNSTGALCSR
LSTDTLMVRNLVADRLAFFAQSISASILAITWGLLLSWRLALVAISLQLFIVGSFYLKLV
MTRNMSKKILHAQNKSSGIASEAVGNHRIITAYYSQEQVMRLYEDTQKGPKKESQKQPLY
AGMALFTRQFLTTTNIAVLYWYGGKLLYQGDITYKHMFQTFYIVVTAGILIAEAGSMTED
LSVGTNALKSIFTILKRDGKMDPLKHDALNPTRINGQIQLREVDFVYLTRPTKMVLNGLS
LKIEAGEVAALVGTSGSGKSTIIGMIQRFYDPTKGSVEVDGIDIKCYNLKALRSFIAWVG
QEPTLFAGTVKENIAYGKENATEAEMIQAASLANIHEFISSMKDGYDTVCGERGMQLSGG
QKQRIAIARAILKNPAILLLDEATSALDVRSETIVQDAIEKTMVGRTCVIIAHRLSTIQR
SNKIVVMDNGSVVEEGSHHDLLAKGEKGAYFSLFSLQQQSFASNKENPCS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacaatgtatcatcaagcaaacctgaaagcagcgagaagaggaggatgcca
ccagggttattaggaacgattgcagaacatgcagattgggtagatattgttttaatgact
ttggggacagcagggtgcattgcaaatggattaagtatgtcgttgatcatgttagtcctc
agtcgaatgacgaatagctatgcatctatggcttccataaaccctgctgatataaatcag
tatgcactcacctacatgtatgttgctattgttgtgggttcaggagcatttatagaaggg
ttctgttggggacatactgcagaaaggcaatcatcacggatgcgcattaaatatttaaaa
gcagttctacggcaagaaattggttacttcgataatactcttgaagcatcccgtgtagtc
acaaatatctcaactgatatctcaataaacattcaaggagttcttagtgaaaagattccg
gacttcattgcgaatctatggatgttcgcaacagctgaattaactgctatgtacctctgt
tggagattagctattgtggccctccctgctatgtttgtgctgattcttccaggagtagtc
tacggaactcttttagccaaaaacgaagagaagctacaggaagcttatgcagttgctgga
gggatagcagagcaggccttttcttcaattaagacagttcattcatatgcaggagaggaa
aggatggtgaatcggttttcaactgcattaggaccgaccctaacccttgggattaaacaa
ggtctattgaagggaatggctttcggtagcattggaatcatatttgctatttttgcactt
atgagttggtatgggagcatcttggtcattgaaaagggaatcaaaggtggagatattctc
agtgctggtgtatgcattgtctatggaggatttggtcttggagcttcattgatgaatata
aagcattttgctgaagccaagatttcagcagctcttgttagcaaaatgatagacagggtt
ccaagcatagactcaacagatgagcaaggtgaaaccatatctgcggttaaaggtgagttg
gagttcagagatattgactttgcatacccatcaagaccagaaagcttggttctaaaaaaa
ttcaacctcaagctgaaggcctaccaaactgttggattggttggtcacagtggctccggt
aagtcaacagtgatcaatctgctagaaagattctatgatcccactgagggggggatatta
cttgatggaattagcataaagtcgctccagttaaagtggttacgtagtcagctaggttta
gtaagccaggagcctatactttttgcaacctcgatcaaggagaatattatattcggcaaa
gagggtgcgacagacgaggagatcgttgaagcagctaaaaaatccaacgcacacaacttc
atcacacaactacctaatgggtacaatacactggtcggagaattgggaactcagatgtca
ggagggcagaagcaacggatttccattgcaagggcactgcttagagaaccgaaaatcttg
cttctggatgaagccactagttctctggactcacattctgagaaggcagtacaggaagct
ttgactcatgcctcagttggaagaacaacaatagtcattgcacattgtttatatgctatc
cgccatgcagacttaattgttgttattaaatcaggggaagtaatagagtctggttcacat
gacgaactaactcgtaatacttgtggatcatactcgatcatggtgtcgcaactgaagaca
atggtcgtggatggtaaaactcaaccaccatctgaaggaattggagtgaaaatcctagaa
tctccaggtagagatgctacaactatggcagaagaaacaataaacggacaaaaactaact
ggatcccatctcaaagaagtgaagaaccaacagtcagatgaagaatacatacgtccatcc
tggtggcacctgatgcagatgactgcacctgaatggaagtcaactctaatgggcagcatt
ggtgctcttattagtggatcggttcaaccattgattgctctctttcaagcagcaatgcta
tctatattttttctcaaagatcatgatgaaatcaggtctcaaacaagaacattatgttat
gcattcatagccatatctgcctctgctatcattgccagtgtgattcagcattactttttt
ggagtgatgggagaaactttaacaaagaagatcagattagcaatgtttgaaaggatcatg
agttttgagattgagtggtttgatcaagaaaacaacagtactggagccctctgttcaaga
ctttctacggatacactaatggtaaggaatcttgtggcggaccgattggcattcttcgcc
cagtcaatctcagcctctattttagcaatcacttggggattgttattgtcttggagacta
gctcttgtagctatctctttgcaactattcatcgttggcagtttctacttgaaattagtg
atgacaaggaacatgtccaagaaaatactgcatgcacagaacaagagcagtggaatagca
agtgaggctgttggtaatcacagaattataactgcatattactcccaagagcaggttatg
agattatatgaagatacacagaaaggccccaagaaagagagccaaaagcaacctttgtat
gcagggatggctttgttcactcgacaattcctaacgaccactaatatagctgtgctttac
tggtatggagggaagctcttgtaccagggtgatatcacatacaagcacatgttccaaaca
ttctacattgtggtaacagcagggatactaatcgctgaggcagggagcatgactgaggat
ttgtctgtgggaacaaatgccttaaaatcgatctttacaattttaaaaagagatggcaag
atggacccattaaagcatgatgctcttaacccaacaaggataaatgggcagatacaacta
agagaggtggactttgtttacctgacgagaccaacaaagatggtccttaacggtttgagc
ttgaagatcgaagctggagaagttgcagctcttgttggaacaagtggatctggaaaatca
acaattattggaatgattcagagattctatgacccgacaaagggttctgtggaagtggac
ggaattgacatcaaatgttacaacctcaaagcattacggtcatttattgcatgggtgggc
caggagcccaccctatttgcaggtacagtaaaagaaaatattgcatatgggaaagagaat
gcaacagaagctgagatgattcaagcagcaagccttgccaatatccatgaatttataagt
tccatgaaagatgggtacgatacagtttgtggagaaagaggcatgcagttatcaggcggg
cagaagcaaaggattgcgattgcccgagcaatcctgaaaaatccagccatcttactgttg
gatgaggcaacaagtgcattagatgttagatcagagactattgtccaagatgctatagag
aaaaccatggttggtaggacatgtgtgatcatagctcatcggttatctacgatacaaaga
tcaaataaaatagtggtgatggacaatggcagtgttgtagaagagggttctcatcatgat
ctgctagccaaaggagaaaagggtgcatacttttcacttttcagtctccaacagcaatct
tttgcaagtaacaaagaaaacccatgctcatga
DBGET
integrated database retrieval system
