Cynara cardunculus var. scolymus (artichoke): 112509228
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Entry
112509228 CDS
T05604
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112509228
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112509228
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Motif
Other DBs
NCBI-GeneID:
112509228
NCBI-ProteinID:
XP_024969854
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All DBs
Position
LG 3:38227334..38238282
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AA seq
1062 aa
AA seq
DB search
MAWLRGKVALGSFPDLAGAVNKISESVKNIEKNFDNALGFEDQPGGASTSINEASHYWSP
ELMAFTGQTDGKGIAAEASKKHESSKKHESSEKHESSKEKEGAGADDSTNTTGQKDGKGI
AESSKTLESSEKHEFSSHPSFSQEKEGADADDLTNTTEEHSSPVRESSEETLKPEEHHVF
SKEKEGYDAEDSTKSNEAHFPHVTEASVKTLKPEEHQAHAVQMNITIPEETDNSAEKPVD
IYAENIAEKPVETNIAISHEATAVADNHIEAEADSQAKPSADDAEESKFLGREENSEIDS
VKNYGSVEDESTNSVDQVSTTSPELNEKNAAPDMQKSDHELNMQDKMTTQEDSAVEAVDS
SYEDQSANESEPLGPQYPVSEVDESVEECQPHLLPSSDDASKMVLEVASKDNNDNAKVHL
VNQLAGDDQRSNLSGNADLKIELETLKKEMKKMETALLGAARQAQVKADEIAKLMNENEQ
LKSIIEDQRRKSNDAEIESLREEYHQRVSTLERKVYALMRERDTLRREQNKMNDANALLK
EKDEIITQVMAEGEELSKKQAVQESTIRRLRAQIREFEEEKKGLITKLQVEENKVESITR
DKAATEKLLQESIEKNHAEVAALKEYYTNALTAAKEAKALAEARANDEARTELEGHLREA
EEREAMLVQTLEELRQMLSRKEQQAVLREDMLRRDIDDLQKRHQASERRCEELVMQVPES
TRPLLRQIAAMQEATATKAEAWAAVERSLNIRLQEAEAKAAAAEEREHSVSERLSQTLSR
INVLEAQISCLRAEQTQLTRSLEKERHRASESRQDYLALKEEADTHKGHANQLKEEMREL
KRKHKHELHEALAQRELLQQEIEREKAARLELQKTARPQLSPVSGQSSIPKPKSPSENGL
TRRLSSASSLSSMEESFYLQASLDSSNTFSERSLREPTITPYYLKSMTPSAFAAALRQKE
GELASYMSRLASMEAIRDSLSEELVKMTEECEKLRSEVALLPSIKAELEALRVRHSAALE
LMGERDEELEELRADIVDVKEMYREQVNMLVNKIQMFSSTGA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcatggttacgcgggaaggtcgcgttagggagcttcccggatttagctggagccgtt
aacaagattagtgagagcgtgaagaacattgagaagaattttgacaatgctttaggtttt
gaagaccagcctggtggtgcttctacttccatcaatgaagcttcacactactggtctccc
gagttaatggccttcacgggacagacagatggaaaaggcattgctgctgaggcttccaaa
aaacatgaatcttctaaaaaacacgaatcttcagaaaaacatgaatcttcaaaggaaaag
gaaggggctggtgctgatgattcaactaacactaccggacagaaagatggaaaaggcatt
gccgagtcttccaaaacactggaatcttcagaaaaacatgaattttcaagtcacccatcg
ttttcacaagaaaaggaaggggctgatgctgatgatttaactaacactaccgaggaacat
tcctcccctgttagggaatcaagcgaagaaactttgaagcctgaagaacatcatgtgttt
tctaaagaaaaggaaggatatgatgctgaagattcaaccaaatccaacgaggcacatttc
ccacatgtcacagaagcaagtgtaaaaactctaaagcctgaagaacatcaagctcacgct
gtgcaaatgaacattacaattccggaggaaacagataacagtgctgaaaaacccgtagat
atatatgcagaaaatattgctgaaaaacctgtagaaactaatatcgcaatatctcatgag
gcaactgctgttgctgacaatcacattgaagccgaagctgattcacaagcaaaaccaagt
gctgatgatgccgaggaatcaaagtttttgggccgtgaggaaaactcagaaattgattct
gtaaaaaattatggatcagtagaagatgagtctacaaattctgtagaccaagtttcaacc
acttccccggagctaaatgaaaagaatgctgctcctgatatgcagaagagtgaccatgaa
ctaaatatgcaagataaaatgaccacacaggaagattctgcagttgaagcagtggattca
tcatatgaggatcaatctgcaaacgagtcagagccacttggacctcaatatcctgtatct
gaagtggatgaaagtgtcgaagaatgccaaccacatttgttgccaagttcagatgatgct
tctaagatggttcttgaagtagcttctaaggataacaatgacaatgctaaagttcatcta
gtaaaccagcttgctggtgatgatcagagaagtaatttgtctggcaatgcagatttgaag
attgaattggagacgttgaagaaggagatgaaaaagatggaaactgcacttctaggagct
gctagacaagctcaggtaaaagctgatgaaattgcaaagctgatgaatgagaatgagcag
ctgaaatctataattgaggatcagaggagaaaatcaaatgacgctgaaattgaatctcta
cgagaagaatatcatcaaagagtttcgactcttgaaagaaaggtttatgctcttatgagg
gaaagggatacactacgtagagagcaaaataagatgaatgatgccaatgctcttttaaag
gaaaaagatgagataatcactcaagttatggcagaaggtgaagagctttcaaagaaacaa
gccgttcaagaatctacaattaggagactacgggcacagattagagagtttgaagaagag
aagaaaggattgataaccaagctgcaggttgaagagaacaaagtggagagtataaccagg
gacaaggcagctacggagaagcttctgcaagaatcaatagagaaaaaccatgctgaagtt
gcagcattaaaagagtactatacgaatgcactgactgcagccaaggaggcaaaagcacta
gcagaggcacgagcaaacgatgaagccagaacagaactagagggccacttaagggaggct
gaggagcgagaagctatgctagttcaaactctggaagaattgaggcaaatgctgagtaga
aaggagcagcaggcagttttaagagaagatatgctaaggagagacatcgatgacctccaa
aaacgacatcaagcaagtgagcgtagatgtgaagagctggttatgcaagttcctgaatct
actaggcctcttttgaggcagatcgcggctatgcaggaagcaaccgctacaaaggcagaa
gcttgggctgctgtggagagatctctaaacattcgacttcaggaagcagaggccaaagct
gcagctgcagaggaaagagaacattctgttagtgaacggttatcccaaacattatctcga
ataaatgttcttgaagctcagatatcatgtttgagagctgagcaaacccaactaaccagg
tctcttgagaaggaaagacacagagcatctgaaagtaggcaggactacctggctctaaaa
gaggaagctgatactcataaaggtcatgcaaatcaactcaaagaagagatgagggaactc
aagaggaaacataagcacgagctgcacgaagcattggcacaacgcgaacttctccagcag
gaaattgaacgtgaaaaagctgcacgtttggaactacaaaagacagcccgccctcagctt
tctcctgtttctggacaaagttccatacccaaacccaagtctccctctgagaatggactg
actcgcagactttcaagtgcgagcagtttaagtagtatggaggaaagtttctatcttcag
gcatctttagactcctctaataccttctccgaaagaagtctcagagagcctaccataacc
ccgtattatctaaagagcatgaccccgagtgcttttgcagctgcgctacgtcaaaaggag
ggtgaacttgcatcttatatgtctagattggcatccatggaagccattcgcgactctctt
tcagaggagttggttaaaatgactgaagagtgtgaaaaactacgatccgaagtggctctg
ctgcctagcattaaggccgagctagaagcattaagagtcaggcactcggctgcactagag
ttgatgggtgaacgggatgaagagcttgaagaacttcgtgcggatattgtggacgtgaag
gaaatgtacagagaacaagtgaacatgcttgtaaataagatccagatgttttcatctacc
ggtgcctaa
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integrated database retrieval system
