Cynara cardunculus var. scolymus (artichoke): 112509243
Help
Entry
112509243 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112509243
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112509243
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112509243
03036 Chromosome and associated proteins [BR:
ccav03036
]
112509243
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112509243
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112509243
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112509243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
112509243
NCBI-ProteinID:
XP_024969867
LinkDB
All DBs
Position
LG 3:complement(39034707..39051152)
Genome browser
AA seq
534 aa
AA seq
DB search
MLPDGHLKNLHVDIYHEIRSGFDPPTAPAPLHRVQTLEPNHPCCTCLTLSEIFTTCVTVD
IISAIEFDKSGDHLATGDRGGRVVLFERTDTKENGVSRKDLEKTDYPSSRHPEFRYKTEF
QSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKIADMNM
DPSKAVGNGNIASSSVSFSHKSSHTTNGEYTDKSYTTLTKDFSPSGGIQSLRLPVVTANE
TSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPAN
MEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDRHSKLFEEQESPGSRSFF
TEIIASISDIKFGRDGRYILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDS
IFDKFECCLSGDGLRVATGSYSNLFRVFGSGPSSTESTTLEASKNPMRRQVQTPSRPSRS
LSSSITRVVRRGGESPDGNGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttgccagatggacacctaaagaatctccacgtagacatataccatgagatccgatct
gggttcgacccacccactgcaccggcaccgcttcaccgggtgcagacgcttgaacccaat
catccttgctgcacttgtcttacattatctgaaatttttacaacttgtgtcacagttgat
atcatctcggctatagaatttgataaaagtggtgatcatcttgccaccggagatcgtggg
ggccgggtggtattatttgagaggaccgatacaaaggagaatggtgtaagtagaaaggat
ttagagaagactgattacccaagtagtaggcatccagagtttcgctacaaaactgagttc
cagagtcatgaacctgagtttgattatttgaagagtttggagatcgaggagaaaattaac
aagatcagatggtgccaaacagccaatggcgccctctttcttctgtctaccaatgacaaa
accatcaaattctggaaggtccaagaaaagaaagttaagaaaattgcagacatgaacatg
gacccttccaaagctgttgggaatggaaatatcgcgagttctagtgtttcttttagccac
aaatcttcacatactacaaatggggaatacacagataaatcttacactactttgaccaaa
gacttttctccttcaggcggcatccagtcattgcgtctaccggtggtaactgctaacgag
acgagccttgttgcaaggtgtagaagagtgtatgcccatgcacatgattatcatatcaat
tcgatctcgaataacagtgatggtgaaacattcatctcggctgatgatcttcggataaac
ctttggaatttggaaattagcaatcagagtttcaacattgttgatgtcaagcctgcaaat
atggaggatctcactgaggtgattacatcagcagagtttcatcctactcactgtaacaca
ctagcttatagtagttcgaaaggatctattcgccttattgatttgcgtcagtccgcatta
tgcgatagacattctaagttgtttgaggaacaagaatcacctggttcaagatcattcttc
accgagataatagcatcgatctcagatatcaagttcggaagggatggaagatacatacta
agccgtgattacatgacccttaagttatgggacatcaacatggactcaggtccggtttcg
acattccaggttcacgaatatttaagacctaagctatgtgacttgtatgaaaatgattca
atcttcgataaattcgagtgctgtctaagtggtgacggtcttcgggtagcaactggttcc
tacagcaatctgttccgtgtatttggctctggtcccagcagtactgaatcaactaccctg
gaagctagcaaaaatccaatgaggcgacaagttcagactccttcaaggccttcgagatcc
ctaagcagcagcataacccgtgtagttagaagaggtggagaaagtccagatggaaatggg
aactcattcgatttcaccacgaagttgcttcatctagcttggcatccaactgaaaactcc
atcgcctgtgctgctgccaacagcttgtacatgtactacgcgtaa
DBGET
integrated database retrieval system
