Cynara cardunculus var. scolymus (artichoke): 112509259
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Entry
112509259 CDS
T05604
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112509259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112509259
04147 Exosome [BR:
ccav04147
]
112509259
04090 CD molecules [BR:
ccav04090
]
112509259
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112509259
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112509259
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112509259
CD molecules [BR:
ccav04090
]
Proteins
112509259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
APS_kinase
DsbC_N
Motif
Other DBs
NCBI-GeneID:
112509259
NCBI-ProteinID:
XP_024969884
LinkDB
All DBs
Position
LG 3:40231092..40237849
Genome browser
AA seq
1489 aa
AA seq
DB search
MAESSFEIEFSSTYHHRRRPRHTTPALSHHQSPAFSFSSSHTSPYPTSRRTHVPPTTPFA
SENDRSWQSEISWQFEPTRNNRGSNLGAALTPWAEPIPSVPPTPGSRVFRRSANDYFLSR
TTAGGGGGGSGSGVGGNFRSFTNPSFEQSSYSRVPLGRIELEGYVAKSNRNENHHRQTSP
TKSAIFANSTDRKKGHLAGNNELSVTDDDLENETSSKHNRDGYGYGRDAQKQSSPHQVYV
RDGDLDEEEDDGDDDYEPEPPKSVGVIGLFKYSTKLDIVLVILGSLGALINGGSLPWYSF
LFGKFVNKIALDDDNDQMMKDVERICVLMVALSGLVVIGAYLQIACWRLVGERSAHRIRT
AYLRSVLRQDVSFFDTDISTSDIMHGISSDVAQIQEVMGEKMAHFVHHICTFICGYTVGF
IRSWKVSLVVLAVTPLTMFCGIAYKAVYVGLATKEVNSYKKAGGIAEQAISSIRTVFSFV
AEQKLADRYDMLLEESVPVGKKLGFAKGLGIGVIYLVTYATWALAFWYGSILVSRNELSG
GAAIACFFGVNVGGRGLALSLSYYAQFAQGTVAASRVFEVIDRIPAIDPYSTMGRRLSGG
HGKVEFKNVSFAYPSRPTLPILNSLNLVVPSQRTLALVGASGAGKSTVFALLERFYDPAE
GLVTLDGHDIRTLQVKWLRSQMSMVGQEPVLFANTILENIMMGKENATKKEAIAACVAAN
AHKFICNLPEGYETQVGDRGTQLSGGQKQRIALARAMIQDPKILLLDEPTSALDPESETM
VQQAIDKISKNRTTMVIAHRLATVRNADRIVVLEHGSVIESGNHQQLIERKGAYFALIML
ASEAVSSEPVSENGEKTERKHETSSAQDLLKSNHVHEISRSEYMKSVHEENDQVETQKPM
KPSTYMISDVWKLQKPEGSMLFIGIVLGMLAGAILSIFPFILGEALNFYFNPDKKKLKTD
VGNLCLVLVGLGVGIILAMTGQQGFCGWAGTNLTRRVRNLLFQSILKQEPGWFDSDENST
GILVSRLSIDCISFRSVLADRYSVLFMGLSSAAVGLGISFYLQWRLALLATLLTPFTLGA
SYFNLIINIGPKLDNGSYDNATRIASGAVSNIRTVATFATQEKIVKSFEQSLSNPKATSV
KRSQITGLALGLSQGAMYAAYTVILLFGAYLVKRKLGDTTFGDVYKIFLILVLSSFSVGQ
LAGLAPDTSTASSAIPAVFWIINRTPLIRGKGRKIESSKLFDVEFKMITFSYPSRPHVIV
LRDFSLKVKGGTMVAVVGGSGSGKSTLIWLTQRFYDPIKGKVLMGRIDLRELDLKWVRSQ
TALVGQEPALFAGSIQENIGFGNPKASFAEIEEAAKEAYIHNFICGLPEGYETEVGQSGV
QLSGGQKQRIAIARAIVKRSKVLLLDEASSALDLESEKHVQEALRKITKRTTTIVVAHRL
STIREANLIAVVQDGKLTEYGSHDRLMTSHHDGVYANLVRAETEANAFA
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcctcctttgagatagagttctcctccacctaccaccaccgccggcggcct
cgccacaccactccagctctctcccaccaccaatcaccagccttctcattctccagttcc
cacacctctccatacccgacttcacgtaggacccacgtaccccccaccactcctttcgcc
tccgaaaacgacagatcatggcagtcggagatctcatggcagttcgaacccaccagaaac
aaccgtggcagcaaccttggcgccgccttaaccccatgggctgaaccaatcccctccgtg
ccacctacgcctggcagccgtgtctttcgccggtcagcaaatgactatttcctttctcgt
actaccgctggaggtggcggcggtggcagtggcagtggtgttggtggtaacttccgtagt
tttactaatccgtccttcgaacagtccagttacagccgtgtgccattgggtagaatcgaa
ctcgaaggctacgttgccaaaagtaatcgtaacgaaaaccatcatcgacaaactagtccc
accaagtctgctattttcgcaaacagtacggatagaaaaaagggtcatttagccggtaat
aatgagcttagtgtgactgacgacgatctagagaacgaaacgagcagtaaacacaaccgt
gatggttatggttatggtcgagatgctcaaaaacagtcgagtcctcatcaggtttatgtt
cgtgatggagatcttgatgaagaggaggatgatggtgatgatgattatgaacctgaaccc
ccaaaatctgttggggttattgggttgtttaagtattcaacaaagttggatattgttcta
gtgatattagggagtttgggagctttgatcaatggaggatctctaccttggtactctttt
ctttttgggaagtttgtcaacaaaattgctttagatgatgataatgaccagatgatgaag
gatgtcgaaaggatatgtgtactcatggtggcattgtccgggctagtcgtgatcggagca
tacttacagattgcttgttggcgattggtgggggaaagatccgctcatagaataagaacc
gcgtatttgaggtcagttctacgccaagatgtcagctttttcgatacagacattagtacc
agcgatatcatgcatgggatctcaagcgatgtcgcccaaatccaagaagttatgggagag
aagatggcgcattttgttcatcacatatgcaccttcatctgtggctacaccgttgggttc
ataaggtcgtggaaggtctctttggtggtccttgcagttactccattaacaatgttttgt
gggatcgcgtataaggcagtttatgtcggattagctacgaaagaagtgaattcttacaag
aaagccggtggcatagcggaacaagctataagctcgatcagaaccgtgttctctttcgtg
gctgaacagaagttggccgatagatacgatatgttattagaagagtctgtgcctgtggga
aagaaacttggttttgcaaagggtttgggaattggtgttatatatttggttacttatgca
acatgggccttggcattttggtacggatccattctggtttcaagaaacgagctatctggt
ggtgccgccatcgcttgcttctttggggtcaatgttggtggcaggggtttggcgctatca
ctgtcgtactatgctcaatttgcacaagggaccgtagcagctagcagagtgtttgaagtt
atcgatagaatccctgcaattgatccttattctacgatggggagaaggctctcgggtggc
catggaaaagtcgagtttaagaatgtttcttttgcttatccatctcggccaactcttccg
attctcaactcccttaatttggtggttccatctcaacggactttagcgctagttggcgcc
agcggtgctgggaagtccacggttttcgctcttttagagaggttttacgatcctgctgag
ggtcttgtaacattggatggtcatgatataaggactttgcaagtgaaatggctaagaagt
caaatgagcatggtgggtcaagagcctgttctttttgcaaacacaattcttgaaaatatt
atgatgggtaaagagaatgccaccaagaaagaagccattgcagcttgtgttgctgcaaat
gcccacaaattcatatgtaatttacccgaaggttacgaaacacaggtgggtgatcgagga
acccagctctcagggggtcaaaaacagcgcattgcgctagctcgagccatgatccaagac
cccaagatccttctgctagacgaacccacaagtgcactcgaccccgagtccgagactatg
gtccagcaggccattgataaaatctcgaagaatagaaccaccatggtgattgctcatcgg
ctggcaacagtcaggaatgccgataggatcgttgttctagaacacggatccgttattgaa
agtggaaaccatcaacaactcatcgaaagaaaaggagcctactttgcactcatcatgctt
gcatctgaagctgtatcatccgaacccgtatcagaaaatggcgaaaaaacggagagaaaa
cacgaaacatctagtgctcaagatctcttaaaatcaaaccatgtccacgagatatcaaga
tcggagtacatgaaatccgttcacgaagaaaacgaccaagtagaaacacagaaaccaatg
aaaccaagtacgtacatgatttccgatgtttggaaactacagaaaccagaaggcagcatg
ctgtttataggcattgttttgggtatgttagcaggtgctattctctccatcttccccttc
attttaggagaagcactcaacttttacttcaatcctgacaaaaagaaactgaaaaccgat
gtcggaaacctctgtttagttctagtcggactcggggtcggaatcattctcgccatgacc
ggccaacaaggtttctgcggttgggctggtacgaacctcacgaggagggttcgcaatcta
ctcttccaatccatattgaaacaagaaccaggatggttcgattctgacgaaaactcaacc
ggaatactcgtttcccggctatccatcgactgcatcagtttcagatcagttctagctgat
agatactcagttttattcatgggtttgagctcagctgctgttggacttggcatttctttc
tatctccaatggaggttagcccttttagctactcttctaacccctttcacccttggagct
agctactttaacctgattattaacattggaccaaagctagataatgggtcttatgataac
gcgactagaatcgcgtctggtgcagtatcaaacattcgaacagtagcaacatttgcaact
caagaaaagattgtcaaatcttttgaacaatctttatcgaacccaaaagcaacatctgta
aaaagatcacaaatcactgggctagcattaggactctctcaaggtgcaatgtatgccgct
tatactgtaatcctcttattcggggcttatcttgtgaaacgaaaactaggagatacgacg
tttggtgatgtctacaagattttcttgattcttgttttgagttcgttttcagttgggcaa
ttggcgggtcttgctccagatacttccactgcatcttctgcaattcctgctgttttctgg
attattaaccgaactccattgattcgtgggaaagggagaaagattgaaagctcgaagctt
tttgatgtggaattcaagatgattactttttcgtatccatcgagacctcatgtgattgtt
ttgagggatttctcgttaaaagtgaaaggtggaacaatggtggcggtggtcggaggaagt
gggtctgggaaatcgacattgatttggttgacacagaggttttatgatccgattaaaggg
aaggttttaatgggtagaattgatttgagggagcttgatttgaaatgggttcgatctcaa
acagctttggtgggtcaagaacctgcattgtttgctggttcgattcaagaaaatattgga
tttgggaaccctaaagcttcatttgcagagattgaagaagctgctaaagaagcttatatt
cataacttcatctgtggcctcccagaagggtacgaaactgaggtgggtcaaagtggggtt
cagttatcaggaggtcaaaaacaaagaatagcaatagcaagggcaatagtgaagagatca
aaagtgttgttactagatgaagcaagtagtgcactggatttggaatcggagaagcatgtt
caagaagcacttaggaagataactaaacggaccaccaccatcgtggtggcgcaccgcctc
tccaccatcagagaggccaacttgatcgcggtggttcaagatggaaagctgacggagtat
ggaagccatgataggctcatgacttcccatcatgacggtgtttatgctaaccttgttcgt
gccgaaacagaagcaaatgcttttgcctga
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integrated database retrieval system
