Cynara cardunculus var. scolymus (artichoke): 112509287
Help
Entry
112509287 CDS
T05604
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112509287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112509287
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112509287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_28
AAA_16
AAA_25
AAA
AAA_33
nSTAND3
RsgA_GTPase
DnaB_C
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
112509287
NCBI-ProteinID:
XP_024969929
LinkDB
All DBs
Position
LG 3:37840690..37852503
Genome browser
AA seq
1435 aa
AA seq
DB search
MDGGDIYKAANSIRLGSLRATSGRASSLRSGSTSVWRNSGMDVFSKSSREDDDEEALKWA
SLEKLPTFDRLKKGLLFGSTGPSNQVDVDNLGTDDRRHLLDRLVKVADEDNEKFLLKLRD
RLDRVGIDLPTIEVRFENVTVEADVNTGSRALPSFINFHIDVFEGILNLFHLLPNSKRHI
TILDDVSGIVKPKRMTLLLGPPSSGKTTLLLALAGTLAKELTCSGKVTYNGHELHEFVPE
RTSAYISQNDVHIGEMTVRETLAFSARCQGVGSRYEMLAELSRRERDANIKPDPDIDVFM
KAAATKGQEASVVTDYTLKLLGLDICADTMVGDQMIRGISGGQKKRVTTGEMIVGPSKVL
LMDEISTGLDSSTTFQIVNSLKQFLHILEGTAVISLLQPAPETYDLFDDIILLTDGKIVY
QGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQQQYWMKRDEPYRFVTAKEFAEAY
QSFHVGRKLGDNLSTPYDKSKSHPAALTHEKYGLNSKELLKACTDREILLMKRNSFVYFF
KLFQLTVMSLIALTVFLRTEMHKDDLEDGGLYTGALFFGVVMIMFNGMSEISMTIAKLPV
FYKQRDFLFYPSWAYALPSWVIKIPVSFLEAGVWTILTYYTMGFDPNVSRFFKHYLILLL
VNQMSSGLFRFIGALGRNMIVANTFGSFAILVVFALGGFVLAREDVKKWWLWGYWSSPMM
YAMNGIAVNEFLGHSWRTPLNGTTLGTWAITGRGFFAEAYWYWIAVAALLGFIFFFNLIF
ALSLAFLNPFGKAQANASAEDEGNAGAVELSSTKKESKDEGSQNKKKGMILPFEPHSITF
DDVKYSVDMPQEMKEQGVGEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK
TGGYIDGDVKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLASDVDENK
RKMFVDEVMDLVELNPLKDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL
DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQELYVGPIGRHSC
ELIKYFEDIEGVSKIKDGYNPATWMLEVSTSAQEMSLGVDFTEIYRNSERYKRNKALIAE
LSVPRSGTQDLHYPTQYSQPFLVQCKACLWKQRWSYWRNPPYTAVRFVFTTAIALMFGTL
FWDLGGKRDSQQDLINAIGSMYAAVIFLGVQNASSVQPVVDVERTVFYRERAAGMYSALP
YAFAQVLVEIPYVCVQTGVYSIIVYSMIGFEWTAAKFFWYVFFQFCCLLYMTFYGMMTVA
ITPNANIAAIIAASFYGIFNLFSGFIIPRPSIPVWWRWYYWGNPMAWTIYGMVASQFGDY
ENVLPNGETVKGYLDRYFGYKHDFLGAVAGVHVGLVLFFAFIFAYCIRAFNFQKR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggtgatatatacaaagcagctaatagcataaggttagggagcttaagagca
acaagtggaagagcatcaagtttaagatctgggagtacttcagtatggaggaattctggt
atggatgttttctcaaaatcttctcgtgaagatgatgatgaagaagctctcaaatgggct
tctcttgaaaagctaccgacgtttgatcgtttaaagaaaggtttgctgtttggatcaact
ggaccatccaaccaagttgatgtagacaatcttggaacagatgatcgaagacatttactc
gataggcttgttaaggttgctgatgaagataatgagaagttcttgttgaagctcagagat
aggcttgatagggttgggatcgatttgcctacaatcgaagtcagattcgagaatgtaacc
gtggaggcggatgttaataccggaagccgagccttacctagtttcataaacttccacatt
gatgtttttgaggggatcttgaacttattccatctacttccgaattcgaaaaggcatata
accatccttgatgacgttagtggcatcgttaagcctaaaagaatgacgttgcttttgggt
cctccgagttccgggaagacgacacttttgttggccttggctgggacactggcaaaggag
cttacgtgctccggtaaggtgacgtataacggtcatgagttacacgagtttgtaccggag
agaacttcagcttacatcagtcaaaatgatgtccacattggagaaatgaccgttagagaa
accttggcgttctctgcaagatgccaaggcgttggctcacgttatgagatgttggccgag
ttgtcaagaagagagagagatgcaaacataaagcctgatcccgacattgatgtcttcatg
aaggctgctgcaaccaaaggtcaagaagctagtgtggtcacagattatactctgaagtta
ttggggttggacatatgtgcagatacaatggtcggggatcaaatgataaggggaatctcc
ggtggacaaaagaagcgtgtcacaacaggtgaaatgatagttggaccatctaaggttctt
ctcatggacgagatatcaaccgggttggatagttctaccacgtttcagatcgtaaattca
cttaaacaatttcttcacattctcgaaggaactgccgtcatttcactcctccagcctgca
ccggagacttatgatttgtttgatgatattatactcttgactgatggaaagatcgtatat
caaggcccgcgtgaaaatgtgctcgagttttttgaatcaatgggattcaaatgcccagag
aggaaaggtgttgccgatttcttgcaagaagtgacatcaaagaaagatcagcagcagtac
tggatgaaaagagacgagccatacagatttgtgaccgccaaggagtttgcagaggcatac
caatcgttccatgttggaaggaaattgggagacaatctctctaccccatatgacaaaagc
aaaagccaccctgctgctctaacacatgaaaagtatggtctgaatagcaaggaactcttg
aaagcttgcaccgatagagaaatattgctcatgaaaagaaattccttcgtttatttcttc
aaactgttccaactaactgtcatgtcactcatcgctttgaccgtgtttttacgaactgag
atgcataaagatgatctagaagatggaggcttgtataccggtgctctattctttggtgtc
gttatgatcatgtttaacgggatgtctgagatttcaatgacgattgcaaaacttcctgta
ttctacaagcaacgggatttcctcttttatccttcgtgggcatatgctcttccatcatgg
gtcatcaagattcccgtttcgtttcttgaagctggagtttggacaattcttacttattat
accatgggatttgatcctaatgtctcgagattcttcaaacactacttgatactgttactt
gtgaaccagatgtcttcgggattgtttcggttcattggtgcactgggtcggaacatgatc
gttgcaaacacgtttggttcatttgcaattctcgtggtctttgccttgggcggttttgtc
cttgcacgagaggatgtcaagaaatggtggttgtggggatactggtcatcacccatgatg
tacgcaatgaacggaatcgctgttaacgagtttcttgggcatagttggagaacacctttg
aacggtacaacgctagggacatgggctatcacgggccgggggttctttgcggaagcttac
tggtattggatcgcggttgcggccttgcttggattcattttcttcttcaatctcattttc
gcgttgtctcttgccttccttaacccttttgggaaagctcaagctaatgcatcagcagaa
gatgaaggcaatgcaggagccgttgagttatcatctacaaagaaggaatcgaaagatgag
ggcagtcaaaacaagaagaaaggaatgattctcccgttcgaaccacattcaattaccttc
gatgatgttaaatactcggttgatatgccacaggaaatgaaagagcaaggggttggtgaa
gacagattgctgctacttaagggtgttagcggagctttccggcccggtgttctcacggca
ctaatgggggtgagtggtgccggaaaaactactcttatggatgtgctcgctggtcggaaa
actggtgggtatatcgacggtgacgtcaagatctcagggtatccaaagaaacaagaaacc
tttgctcggatttctggctattgtgagcaaaatgacatccattctcctcatgttactgtt
tacgagtctttgctttactcggcctggctcaggttggcatcggatgttgatgaaaacaaa
agaaagatgtttgttgatgaggtgatggatcttgtggaactcaacccattgaaggatgca
cttgtcgggttgcccggagtcaacggcttgtcaaccgaacagcgaaagcggttgaccata
gccgttgagcttgtggctaacccgtccataatatttatggacgagccaacctctgggcta
gacgctagagccgctgccattgtgatgagaaccgttaggaacaccgtggacacaggaaga
acagttgtttgcaccattcatcaaccaagcatcgacatttttgaagcttttgatgagctc
ttcttgatgaaaagaggaggacaagagctatacgttggacccataggtcgccattcttgc
gaattaatcaagtattttgaggatatcgaaggtgtaagtaagattaaagacggatataac
cccgcaacatggatgttggaagtcagtacttcagctcaagaaatgtctcttggagtcgat
ttcactgaaatctacaggaattcagaacgttacaagagaaacaaagctcttatcgccgaa
ctaagtgtaccgcggtccggcactcaagatttgcattacccaactcaatactcgcagccg
ttcctcgtccaatgtaaagcatgtctatggaaacaacgatggtcgtactggagaaaccct
ccttacaccgccgtacgctttgtcttcaccactgccatcgcgctcatgttcggtaccttg
ttttgggatcttggcgggaaaagggacagtcaacaggatctgataaacgcaattggttct
atgtatgctgcggttatcttcttaggagtccaaaatgcatcatcggtgcaaccagttgta
gatgtagagcgcaccgtcttttatagagaaagagctgccggaatgtattccgccttgccg
tatgcctttgctcaggttttggtggaaatcccgtatgtatgtgtgcaaaccggagtatat
agtatcatagtgtactcgatgatcggctttgagtggactgctgccaaattcttttggtat
gtgtttttccagttctgctgtttactctacatgaccttctacggtatgatgaccgtcgcc
atcactcccaacgccaacatcgccgcgatcattgccgcctcattctacgggatcttcaac
ctcttttcgggattcatcattccacgacctagcattccggtgtggtggagatggtactac
tggggaaacccgatggcatggactatttacggcatggttgcttcacagttcggggactat
gaaaatgtgcttccaaacggtgaaaccgtaaaaggttatttggaccgatattttggttac
aagcatgattttctcggggccgtggccggggtgcacgtcggattggttctgttctttgcc
ttcatctttgcttactgcatcagagccttcaatttccagaagagatga
DBGET
integrated database retrieval system
