KEGG   Cynara cardunculus var. scolymus (artichoke): 112509310
Entry
112509310         CDS       T05604                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112509310
Enzymes [BR:ccav01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112509310
Chromosome and associated proteins [BR:ccav03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     112509310
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112509310
NCBI-ProteinID: XP_024969962
LinkDB
Position
LG 3:complement(31738420..31747090)
AA seq 663 aa
MAFPSGSSNGSGTQVASLVSGEQRRVGLVYDERMCNHSTPRGEDHPENPDRIRAIWNKLV
SAGIPQRCVVFNAKEVKDTYIAEVHTNNHINLIKTISSKKLAPQRNRVAAKYNSIYFNEG
SSEAAYLAAGSVLEAAEKVAKGELNSAFAIVRPPGHHAEENQPMGFCLYNNIAIATSFLL
NQKELDIKKILIVDWDVHHGNGTQKMFWKDSRVLFFSVHRHEFGSFYPAGDDGHYIMMGE
GPGAGYNINVPWENGQCGDADYNAVWDYILIPVAREFNPDIILISAGFDAAIGDPLGGCR
ITPHGYSIMLKKLMEFSKGKIVMALEGGYNLNSLANSVLACVEMLLEDKPIVESFEVYPF
ESTWSVIKAVREELSAFWPVLAEKLPEKLPSRVTPQVQIYSSQSDDEYDDGPNTLSEDLQ
EDVTIPLSKLKVSDDAHDAGQAAAASPAWRSELSKIDVWYASFGSNMSESRFRCYIEGGQ
AEGMRRPCKGAVDKSQPKEVLWKIVPHRLFFGRESTITWGPGGVAFLHPASSDQEKTYMC
LYRITLEQFNDVLLQENVLTDTSSPFFDLNALDSIENEKNIPLEALKDGWYHNVVYLGKE
KDIPILTMTCTVGHVEDFKSGKTPICAPAKEYADTLVRGLVLGKQLSEDEATVYIQEAST
KPL
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcttttccgtccggtagcagcaatggaagtggaactcaggttgcatcattggtatcc
ggagaacaacgtcgtgttggcctggtatatgatgaacggatgtgtaaccattcaacacct
agaggcgaagaccatccggaaaaccccgatcgtattcgtgctatttggaacaaactcgtg
tctgctggaattccacagagatgtgtggtctttaatgccaaagaagtgaaagacacatat
atagctgaggttcatactaataatcacattaatttgatcaagactataagctccaaaaag
ctggccccacaaagaaacagggtggctgcaaaatacaattcaatatattttaatgaaggt
tcatcagaagctgcttatcttgctgctggatctgtgcttgaggctgctgagaaagttgca
aaaggggagcttaactctgcctttgcaattgttagacctcctggacaccatgcagaagaa
aatcaaccaatgggattctgtctatacaacaatattgcaattgcaacaagctttcttctt
aaccaaaaagaattggatatcaaaaaaatattaattgttgactgggatgtccatcatgga
aatggcactcaaaagatgttctggaaggactctcgagtgctgttcttctctgttcacagg
catgagtttgggagtttttatcctgctggtgatgatggtcattatatcatgatgggtgag
ggaccaggtgcaggatataatataaacgttccctgggagaatggtcagtgtggagatgca
gattataatgcagtttgggactatatattgatcccagttgcaagagaatttaaccctgac
ataattctaatttcggcaggatttgatgcagccattggcgatcctctaggaggctgccgt
atcacaccacatggttattctataatgctgaagaagttgatggagtttagcaagggaaag
attgttatggcgttggaaggaggatacaatctcaattctttagccaattcagtacttgct
tgtgtagaaatgctgctagaagacaaacctattgttgaatcctttgaggtttatccattt
gaatccacatggagtgtgattaaggcggttcgtgaggaattaagtgcattttggccggta
cttgcagagaagttgcctgagaagttgccaagtagagtaacgcctcaagttcagatatat
agctcgcagtcagatgatgagtatgatgatggtccaaatacattatcagaggatcttcag
gaggatgttacaataccactttcaaaactgaaagttagcgatgatgctcatgatgcaggt
caagctgctgctgcttctccagcttggagatctgagttatcaaaaattgatgtttggtat
gcctcttttggatcaaacatgagtgagtcaagattccgctgttatatagaaggtggccag
gccgaaggcatgcgaaggccatgtaaaggggctgtagacaaaagccagccgaaggaggtc
ctgtggaagatcgttcctcaccgtttattctttggtcgagagagtacaattacttggggt
cctggaggggttgctttccttcatcctgcaagtagcgatcaggagaaaacctatatgtgc
ctctataggatcactcttgagcagtttaacgatgttctgcttcaggagaatgtccttaca
gacacaagttctcctttctttgatctgaatgctttagactccatcgaaaatgaaaagaac
attcctttggaagctctcaaggatggttggtaccataacgttgtttacttggggaaggag
aaggatattccaattctgacaatgacgtgcactgttggtcatgttgaggactttaaatct
gggaagacaccaatttgtgctccagccaaagaatatgcagacaccttggtgagaggactt
gtactgggaaagcagctgtcagaagatgaagccactgtttatatacaggaagcctctact
aaaccattatga

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