Cynara cardunculus var. scolymus (artichoke): 112509336
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Entry
112509336 CDS
T05604
Name
(RefSeq) ABC transporter G family member 35-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112509336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112509336
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112509336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
AAA_16
AAA_28
AAA
AAA_25
AAA_33
ABC2_membrane_3
nSTAND3
AAA_30
RsgA_GTPase
DO-GTPase1
Baculo_DNA_bind
RuvX
NSP2_gammaCoV
Motif
Other DBs
NCBI-GeneID:
112509336
NCBI-ProteinID:
XP_024970012
LinkDB
All DBs
Position
LG 3:38594899..38602636
Genome browser
AA seq
1461 aa
AA seq
DB search
MEEEGKLSMSRSVGRSIGRSFSRAAGSWRMEDVFSAGGGASHDGRSSRHSMEDEEALRWA
ALEKLPTYNRLRTTIFKSYIPADQQEMANDKMLLDVRELDPHARQSFIDKIFKVAEEDNE
RFLRKFRDRVDKVGISLPTVEVRFKNLSIEADCHVGDRALPTLINSARNIAESLLAAAGI
SFSEKAKLRILKDASGVIKPSRMALLLGPPSSGKTTLLLALAGRLDPSLKVEGEITYNGH
NLNEFEPRRTSAYISQNDIHVGELTVKETLDFSARCQGVGSRLEMLTELARREKEAGIFP
EAEVDLFMKATAIEGDQSSLITYYTLRILGLDICRDTFVGDQMRRGISGGQKKRVTTGEM
LVGPAKTLFMDEISTGLDSSTTFQIVKCLQQVVHLTESTIFMSLLQPAPETFDLFDDIIL
LSEGQIVYQGPRDHVVEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRSRPYRYIP
VSEFSQRFKRFHVGEKMASELAVPYDKNQSHKAALVFKKYLVPKMELLKASWDKEWLLMK
RNAFIYVFKSIQIVFIGFIATTLYLRTEMKHKNEVDGAIYVGALLNSLLINMFNGLADLS
LIVMRLPVVYKQRDLMFHPAWAFTLPAFLLRIPISILESIMWCGILYYGVDLAPDATRFF
KHLLLVFLIQNVAAGLFRLIAGVCKTMNIANTGGSVILLLIFLLGGFILPKTRIPNWWEW
AYWISPLSYGFKAFTVNEFLDDRWTSIRSTDGTTNVGYAVLRNLDVPTEESTYWIGAAAL
VGFILLFNVLFTIALMYLEAPGKPQAIISKEEAAAMEGDQGTNQQQSVQSSEKEMHQISK
DGNGVSKKGMVLPFTPLAMSFDNMNYYVDMPSEMREQGVTENRLQLLRDVTGAFRPGVLT
ALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQTDIHSPTIT
IHESLIYSAFLRLPKEVSKEEKMTFVQEVMELIELDNIKNAIVGLPGVSGLSTEQRKRLT
IAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFESFDE
LLLLKRGGQVIYGGPLGRHSSKIIEYFEEVAGVPKIPERYNPATWMLEVSSGAAEIRLGI
DFAEHYSASALHQRNKALVKELSVPPPGAVDLRFETQYAQSMWGQFTSCLWKMWWSYWRN
PDYNLVRFFFTLLCALMVGTVFWKIGNKKSSSNDLSTTIGAMYAAVFFVGINNSQTVQPV
VATERTVFYRERAAGMYSSLPYAMAQVFVEIPYVFLQTTYYTLIVYSMVSFEWTVPKFFW
LFFINFFSFLYFTYYGMMTVSITPNEQIAAIFAAGFYLLFNIFSGFYIPRPKIPGWWVWY
YWICPMAWTVYGCIVSQYHDADNPIFVPGMATDPPMTWYIKDYYGFELDFMGPVAAVLIG
FCVFFAFLYATFLRTLNFQMR
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagggtaagcttagtatgagccggagtgtggggagaagcatcggaagaagt
ttcagtagggccgccggaagttggagaatggaagatgtgttttccgccggtggtggtgcc
agtcacgacggccggagtagtcgtcactccatggaagacgaagaagctctacgatgggct
gctttggagaaactaccaacttataatcgattacgaaccaccatcttcaaatcttatatt
ccggccgatcaacaagaaatggcgaacgataagatgttgttggatgttcgagaactcgat
ccacatgctcgacaaagttttatcgacaagatttttaaagttgctgaagaagataatgaa
agattcttgagaaaattcagagatcgagttgacaaggttggaatctcgcttccgacggtg
gaagtccggtttaaaaatttgtcgattgaagccgattgtcacgtcggagatagagcactt
ccgacgttgataaattcggccagaaacatcgccgaatcccttttagctgccgccggaata
agtttttccgagaaagcgaaacttcggattcttaaagatgcttccggagtcatcaaacca
tcaaggatggcacttctgttggggccgccgtcttccggtaagacgacacttctgttggct
ttggcgggaaggctagatcccagcttaaaggttgaaggagagataacttacaacggtcat
aacctcaacgaatttgaacctcggaggacctcagcctacattagccagaacgatattcat
gtcggagaattaaccgtcaaggaaaccctagatttctccgcaagatgccaaggcgttgga
tctcgattagaaatgctaacggagcttgcacgaagagaaaaggaagccgggatcttccca
gaagccgaagtcgatcttttcatgaaggcaactgccatcgaaggagatcagagcagtttg
attacttactacactctaagaattttgggacttgatatctgccgggatacctttgttggc
gatcaaatgagacgtggaatctctggcggacaaaagaagcgtgtgaccaccggagaaatg
cttgttggacctgcgaaaactctgtttatggacgagatttcaaccggtctagacagttcg
actacatttcagatagtgaaatgcttgcagcaagttgtacacttgactgaatcaacaatc
ttcatgtccttactacagccagctccagaaacgttcgatcttttcgatgacatcattcta
ctatccgagggccagatcgtgtatcaaggaccacgagaccacgttgttgagttcttcgaa
agttgtggattcaagtgtccggagagaaagggtactgctgacttcttgcaagaggttaca
tcgaaaaaggatcaagaacaatattgggcagatagaagcaggccatacagatatatccca
gtgagcgaattctctcaacgattcaaacggttccacgtgggagaaaagatggcgagcgag
ttggcagtcccgtatgacaagaaccaaagccacaaagccgctctagttttcaagaaatac
ttagtcccgaaaatggagctccttaaggcttcatgggataaagaatggcttttgatgaaa
agaaatgctttcatttacgtcttcaagtctatacaaatcgtgtttataggatttatcgcc
acgactttgtatttgaggaccgagatgaaacacaagaatgaagtagacggtgcgatctat
gtaggggcgcttttgaacagtctgctcattaacatgtttaacgggcttgctgatctttca
ctcatcgttatgaggcttcctgttgtttataagcaacgggatctcatgttccatcctgca
tgggctttcacacttccagcattcttgctacgaattcccatatctatactcgagagtata
atgtggtgtggcatcctttactatggtgttgatctcgcccccgatgccaccaggttcttc
aagcatctcctgttggtttttctgatccagaatgtggcagcaggactgtttagactcatt
gctggtgtttgtaagacgatgaacattgcaaacacgggtggatccgtcatacttctgctt
atatttcttttgggtggtttcatccttcctaaaacccgaattccaaactggtgggaatgg
gcttattggatttcgccgctgtcgtatggattcaaagcattcacagtaaacgagtttctt
gacgataggtggacgagcataaggagtacggacggtacaaccaacgtcggttacgcagtg
ctaagaaatctcgatgtcccgaccgaagaaagcacatactggatcggtgctgcagctctt
gtcggttttattcttctcttcaatgttctcttcacgatcgctctaatgtatttagaagcc
cctggaaaaccacaagcaattatctccaaggaagaagctgcagccatggaaggtgatcag
ggtaccaaccaacaacaaagtgttcaatcctcagaaaaggaaatgcaccagataagcaag
gatggaaatggtgtttctaaaaaaggaatggttcttccgtttactccactcgcaatgtca
ttcgacaacatgaactattatgtcgatatgcctagtgaaatgagagaacaaggggtgacg
gaaaaccgattgcaattgcttcgtgatgtaacgggtgctttcaggccaggagttctaacg
gcattgatgggagtcagtggagctggtaaaacgacgttgatggatgttttagccggaaga
aagacaggcggttatatcgaaggagatatcagaatatcgggattcccaaagaaacaagaa
acgtttgcccgaatctctggatattgtgaacaaaccgatatccattctcccacgatcacc
attcacgaatctctgatctactcggcgttcctccggcttccaaaagaagtcagcaaggaa
gagaaaatgacttttgtgcaagaagtgatggagcttattgaactagacaacatcaagaac
gcaatcgttggacttccgggagttagtggtttatcaaccgaacagagaaagaggctaaca
attgcagtcgagctcgttgctaacccttcgatcatcttcatggatgaaccaacgtcaggg
cttgatgcaagagctgcagccattgttatgagggccgttagaaacaccgtggacacagga
agaaccgttgtttgcaccattcatcagcccagtatcgatatcttcgaatcattcgatgag
ttgctgttattgaaaagaggaggacaagtgatctatggaggaccattaggaagacactct
tcaaagattatcgagtatttcgaggaggttgctggggttccgaagattccggagaggtac
aatccagcaacatggatgttggaagtcagttccggtgctgcagagatcaggctcgggatt
gatttcgccgaacactacagcgcatccgctttgcaccagaggaacaaggctttggtgaag
gagttaagcgtaccgcctccgggagctgtagatcttcgcttcgaaacacaatatgcgcag
tcgatgtggggtcaattcacgtcgtgtttatggaaaatgtggtggagttactggcgtaat
cccgactataatcttgtccgattcttcttcactttgctttgtgcactcatggttggaacc
gtattttggaagatcggcaacaaaaagtcgagcagcaatgatctgagcacaacgatcgga
gccatgtacgcagctgtatttttcgtcggtattaacaattcgcaaaccgttcagccagtg
gtcgcaacagaaagaaccgtcttctatcgtgagcgagccgctggaatgtactcatcatta
ccatatgccatggcacaggtgttcgtagagataccatacgtatttcttcaaacgacatat
tacactcttatcgtctactccatggtatcattcgaatggaccgtacccaaattcttctgg
ctcttcttcatcaacttcttttcattcctctacttcacgtactacggaatgatgaccgtt
tccatcacaccaaacgagcaaatcgcagccattttcgcagctgggttctacttgctcttc
aatatcttctccgggttttacatcccgagacccaaaattcccggatggtgggtgtggtac
tactggatctgccccatggcgtggaccgtgtacgggtgcatcgtttcgcagtatcatgat
gccgataacccgatattcgtgccggggatggcgacggacccaccgatgacgtggtacatc
aaggactactatggttttgagttggatttcatgggacccgttgcggccgttctaatcggg
ttctgcgtattcttcgctttcctctatgccacattcctgaggactttgaacttccaaatg
agatag
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integrated database retrieval system
