Cynara cardunculus var. scolymus (artichoke): 112509391
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Entry
112509391 CDS
T05604
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112509391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112509391
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112509391
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112509391
NCBI-ProteinID:
XP_024970096
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All DBs
Position
LG 3:3604969..3608232
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AA seq
257 aa
AA seq
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MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPDAERIHKGRILEPAEKLKGRSRSR
SPRPSSRHRDDYKDKDYRRRNRSRSRDRSDHERHRGRDRERHRSRSRSRSPDYRKERRRG
RYDDEKGRSRSPNRSISPARRSGSPRRSPSPRRTPPSRSRSPVARIEKERSATPKSVSPR
GRADSRSPSPQRSDADE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagagcaggcccgccggacatcagagacacctactcgctcctcgtt
ctcaacatcaccttccgtacaactgctgatgatttgttccctctttttgataagtatggg
aaggttgttgatgttttcatccctagggatcgaaggactggcgattcacggggatttgcc
tttgttcgatataagtatgctgatgaggcccagaaggcagtggagaagcttgatggaaga
gttgttgatggcagagagataatggttcaatttgccaaatacggccccgatgctgaacgg
attcataaaggaaggatactagaaccagctgaaaagttgaagggaaggtcaaggagccga
agtccaaggccaagttccaggcatagagatgattataaggacaaggattacaggcggaga
aaccgtagcagaagcagggacaggtctgatcatgaaaggcatcgaggaagggacagggaa
cgccaccgcagtagaagtcgcagcagaagtcctgactatcgcaaagaacgcaggagagga
agatatgacgatgagaaggggcgaagtcgatctcctaacagaagcatttctcctgcccgt
cgtagtggtagccctcgaaggagcccatctccacgcagaacgcctccttcaaggagcagg
agccctgtagcacgcattgaaaaagagcgctcagctactccaaaaagtgtttcaccacgt
ggcagagccgactctcgaagcccatcgccacaacgttctgatgctgatgaatga
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