Cynara cardunculus var. scolymus (artichoke): 112509591
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Entry
112509591 CDS
T05604
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112509591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112509591
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112509591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112509591
NCBI-ProteinID:
XP_024970383
LinkDB
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Position
LG 3:complement(506379..510551)
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AA seq
265 aa
AA seq
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MSGCFSRTIYVGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFANARDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSGDGRGDYGGGHRSGSSSGRFGISQHSEYRVV
VRGLPSSASWQDLKKISQDHMRRAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDD
TEFRNPWTKTYIRVRKYDRSPSRSPSRSCSRGRSSKSLQRSPSESRSASPGKPTRSRSRP
RSRSRSRSRLRSKSMSESPRKVRSP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgcttctcacgcacaatctatgttggaaacctgccactggatataagagaa
tgggaagttgaagatcttttctataagtatgggcgcatattggacatagaattgaagatt
ccacctcgtcctccttgttattgttttgtggagttcgccaatgctcgagatgcggaggac
gcgattagggggcgggatgggtataattttgatggttgccgtctgagggttgagcttgct
catgggggtcgtgggcaatcatcttcaggtgatggccgtggtgactatgggggtggccat
cgcagtggcagcagcagtggacgttttggcatttcacaacattctgagtatcgagttgtc
gttcgaggtctgccatcatctgcttcgtggcaggatcttaagaaaatatctcaggatcat
atgcgtagggctggtgatgtatgttttgctgaagtttcccgtgatagcgaggggacattt
ggtcttgttgactataccaactacgaggacatgaaatatgctataaggaagcttgatgat
accgaattcagaaatccatggacaaagacgtatattcgggtaaggaagtatgatcgtagc
ccttctaggagtccaagtaggagctgcagcaggggcaggagcagcaaatccttgcagcga
tcgccatcagaatctagatcggcatctcctgggaagccgacaaggtcaaggtcaaggcca
aggtcaaggtcaaggtcaaggtcaaggttaaggtcaaagtcaatgtcagaatcacctcgc
aaggttcgtagtccctga
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