Cynara cardunculus var. scolymus (artichoke): 112509606
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Entry
112509606 CDS
T05604
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142
Lysosome
ccav04144
Endocytosis
ccav05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112509606
04142 Lysosome
112509606
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112509606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112509606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112509606
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
112509606
Exosome [BR:
ccav04147
]
Exosomal proteins
Proteins found in most exosomes
112509606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
112509606
NCBI-ProteinID:
XP_024970423
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All DBs
Position
LG 3:complement(7697227..7702818)
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AA seq
1156 aa
AA seq
DB search
MMAQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAHLQTKVLEINLVTFP
NVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAIEPQSLVE
FFGTLSREWGLECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVESCIKLFEQFKSYEGLYF
FLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARP
LINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLI
LSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHF
LTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNRNSLFKLQARYVVERMDG
DLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVL
QNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFK
KFNLNVQAVNVLLDNIQSIPRAVEFAFRVEEDAVWSQVAKAQLRDGLVSDAIESFIRADD
ATQFLDVIRASEDTECYHDLVKYLLMVRGKTKEPKVDSELIYAYAKIDRLSDIEEFILMP
NVANLHNVGDRLFDEALYEAAKIIYSFISNWAKLAVTLVRLQQFQGAVDAARKANSAKTW
KEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAH
MGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDN
AASTVMNHSPEAWDHMQFKDIAVKVANVELYYKAVHFYLQEHPDLINDVLNVLALRVDHT
RVVDIMRKAGQLPLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQI
GLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEEL
LVYFIDQGKKECFASCLFVCYDLIRPDVALELAWLNHMIDFAFPYLLQFIREYTGKVDEL
IKDKIESIKENKAKENEEQDVIKQQNMYAQLLPLALPAPPGMGGGQMGGGFAPPPPMGGM
GMPPMPPFGMPPMGSY
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccaaatggaaggaggttgtcctgttgattacaacaccattacagatcttttt
cttcagaggaacttgatacgggaggcaacagcttttctcttggatgttcttaagcccaat
ttgccagaacatgctcatctccaaactaaggtccttgaaatcaaccttgtaacattccct
aatgttgctgatgccatattagctaatggtatgttcagtcactatgatcggcctcggatt
gctcaactttgtgagaaagcaggtctttatgtccgagcccttcagcattacagtgaattg
ccagatatcaaacgtgtcattgtgaatactcatgcaatagagccacagtctcttgtagaa
ttttttgggactctatcacgggaatggggattggagtgcatgaaggatcttttactggtc
aatttgagaggaaaccttcagataattgttcaggttgccaaggaatattgtgagcagctg
ggtgttgaatcatgtattaaactttttgagcaatttaagtcatatgaaggcctttacttc
tttttggggtcgtatttgagctctagtgaggatcctgacatacactttaagtacattgag
gcggctgcaaagacgggacaaattaaggaggttgagcgtgtcacaagggaatcaaatttc
tatgatgctgaaaaaaccaagaattttctaatggaagcaaagcttcctgatgcaaggcca
ttgatcaatgtgtgcgatcgctttggatttgttccggatctcactcactacctctatacc
aacaacatgcttcggtatattgaaggttatgttcagaaggtcaatcctgggaatgctcca
ttagttgtgggacagcttcttgatgatgagtgccctgaggatttcatcaaaggtttgatc
ctttcagtccgatctctgcttccggttgagcctcttgtggatgagtgtgaaaagaggaat
agacttcggttactaactcagtttttggagcatcttgtgagtgaaggaagccaagatgtc
catgtccataatgcattgggcaagattattatagacagcaataacaacccggagcacttc
ctgaccaccaacccgtattatgattcacgtgttgtggggaaatactgtgagaagcgtgat
cccacgcttgctgttgttgcataccgcagaggacaatgtgatgacgaacttattaatgta
acaaacaggaactctctgtttaagttgcaagcgagatatgttgtggagaggatggatggt
gatctttgggagaaggttcttaacccagagaatgaatatagaaggcaactcattgatcaa
gttgtctctactgctctgcctgagagcaagagccctgagcaggtttctgctgctgttaaa
gctttcatgactgctgatcttccccatgaactaattgagctccttgagaaaattgtcctc
caaaactctgcttttagtgggaatttcaatctgcaaaacctgcttatcttgactgccatt
aaggcggacccatcacgagttatggactacatcaacagattagacaactttgatggacct
gctgttggagaggttgctgtagaagcacaactttatgaagaagcatttgcaatattcaag
aagttcaacttaaatgttcaagcagtcaatgttttgttggataatatccaaagtattcca
cgggctgttgagtttgcattccgagtcgaagaagatgctgtgtggagccaggtggctaaa
gctcaactcagagatggactagtgagtgatgcaatagagtcattcatccgtgctgatgat
gctactcaattcttggatgttattcgtgcttctgaggatacagaatgttaccatgatttg
gtgaagtatctcctgatggttagagggaagaccaaggagccaaaggtggacagtgagctt
atctatgcgtatgcaaaaatcgacaggttgagtgacattgaggaatttatcctcatgcca
aatgttgctaacctacataatgttggtgatcgtttgtttgatgaagctttgtatgaggct
gccaagatcatatactccttcatctccaactgggctaagctggcagtcacactcgtgaga
ctgcaacagtttcaaggggctgttgatgctgctcgtaaagcaaatagtgcaaagacatgg
aaagaagtttgcttcgcttgcgttgatgctgaggagttccgcttagctcaaatatgcggt
ctcaatattattgtgcaggtggatgatctggaagaggtgagcgaatactaccaaaataga
ggatgcttcaatgagctgatatctcttatggagagtggtttagggttggaacgggctcat
atgggcatcttcaccgagttgggtgtcctctacgctagataccgtcatgagaagttgatg
gagcatattaaactcttctcgacccgtcttaacattccaaagttaatccgtgcttgtgac
gagcaacaacactggaaggaacttacctatttgtatattcaatatgatgagtttgacaac
gctgcctcgactgtcatgaatcattctccagaagcttgggatcatatgcaatttaaagat
attgcagttaaagtggcaaatgttgagctctactacaaggcggttcacttctatttacaa
gaacatcccgaccttatcaatgatgttctcaatgtccttgcactacgtgttgaccacaca
cgtgtggtggacataatgcgtaaggcgggccaacttcctcttgtgaaaccatacatggtt
gcagttcagagcaataatgtatctgctgtaaacgaggcactgaatgaaatatacgtcgag
gaggaagactacgataggttgcgtgaatctattgatttgcatgataactttgaccagatt
ggccttgcacagaagattgagaaacacgagcttcttgagatgaggcgtgtggctgcatat
atttacaagaaggccggtagatggaagcagtctattgcattgtctaagaaagacaaggtt
tacaaagatgcaatggagactgcctcacaatctggggatcgtgagcttgctgaagagttg
cttgtttatttcatcgaccagggaaagaaggaatgctttgcttcgtgtctctttgtttgt
tatgatttgattcgtccagatgttgctcttgagctagcctggttgaaccacatgattgac
tttgccttcccgtatctgcttcagtttatccgtgaatatactggtaaggttgatgaacta
atcaaggacaagatagaatcaatcaaggaaaataaggccaaggagaacgaggagcaggat
gtcattaaacagcagaatatgtatgcccaactgctcccacttgctctacctgctccaccg
ggtatgggtggtggtcaaatgggtggcggatttgctccaccaccacccatgggtggaatg
ggaatgccgccaatgcccccgtttggaatgccaccaatgggttcatattga
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integrated database retrieval system
