Cynara cardunculus var. scolymus (artichoke): 112509636
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Entry
112509636 CDS
T05604
Name
(RefSeq) proteasome subunit alpha type-1-B-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112509636
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112509636
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112509636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112509636
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
112509636
Peptidases and inhibitors [BR:
ccav01002
]
Threonine peptidases
Family T1: proteasome family
112509636
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
112509636
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112509636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
112509636
NCBI-ProteinID:
XP_024970470
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All DBs
Position
LG 3:complement(29933192..29937800)
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AA seq
278 aa
AA seq
DB search
MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
RKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYGYTYESPLPVGRLVVQLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFENFT
GSSRDELIKDALFAIRETLQGEKLTSTVCTVAVVGVGEAFNILDQATVQALINEFEISGE
EGPTNEGVAEEAVGEAGGAAATQEGGAAPEQETAPMDI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaaccagtacgacaccgacgtcacaacatggtcgccggcggggaggttgttt
caggtagagtacgctatggaggcagtcaagcaaggatcggcggccattggtctccgatcc
aagactcacgttgttctcgcatgtgtcaacaaagctaattcggaactttcatcgcatcag
aggaagatcttcaaggtcgatgaccacatcggcgtagccatcgccggtctcactgctgac
ggccgtgttttgtcgcggtacatgagatccgagtgcatcaattatggctatacctacgag
tctcctcttcctgttggtcgtttagttgttcagctcgccgacaaagctcaggtttgtacc
caacggtcatggaaacgcccttacggtgttggtctgctggtagccggcttggatgaatct
ggggctcatctctactataactgtcctagcggaaattactttgaatatcaagcttttgcc
atcggttccaggtcacaagccgcaaaaacatatttggagcgcaagtttgagaatttcaca
ggttcctctcgagatgagctgatcaaggatgcactatttgccataagagagaccttgcaa
ggtgaaaaacttacaagcactgtatgcacggtggctgtggttggtgtaggagaagccttc
aatatattggaccaagcaactgtacaggcattaattaacgagtttgagatttccggagaa
gaaggtcctacaaatgagggtgttgcagaggaagctgtgggtgaagctggtggtgccgcc
gccactcaggagggtggagccgcaccagagcaagaaactgcaccgatggatatttga
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