KEGG   Cynara cardunculus var. scolymus (artichoke): 112509644
Entry
112509644         CDS       T05604                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112509644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112509644
Membrane trafficking [BR:ccav04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    112509644
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_Vps41 Beta-prop_VPS8 WDR90_beta-prop_4th EIF3I Beta-prop_IFT140_1st Beta-prop_RIG_2nd KNTC1_N PROPPIN Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 WD40_Gbeta Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 112509644
NCBI-ProteinID: XP_024970480
LinkDB
Position
LG_3
AA seq 420 aa
MDYKFCLALDSWTPVFRHSESVDSQQASIRSYKCLRLKSGQVMEENCKKYGIPLYGASFV
PNNALRSSDGEPQQEDEDSGNGSNYVIFAGGGGEGRSGIPNALIISLFDSTSNSLSDQPV
DILGTANDLPYRMAVHPGGEGVICSLSKSCRWLEWDAIRNEDIINLSLKPSEKVLEQLED
VGQQLAVTFSHDGSLLAVGGEDGTLRVFKWPSMALVLDAPKAHTSVKNLDFSLDGKFIVS
VGSGPGRVWDISSSMAKASLPKENDEVFGFCRFSQNSKNDQVLYVTAMRDRGGSIVKWNT
TTWKRISSKHIVRDPISAFSVSNDGKFLAIGTIEGDILILNSSSMKVQTVVKKAHLGLVT
ALTFSDDSRALASASFDSSARVTLIKETTKNGGVSVWIILLIVILLAAALYYAKTEGFLL
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggactacaagttttgtcttgccttggacagttggactccagtatttcgacattcagag
tcggtcgattctcagcaagcgtcaattaggtcatacaagtgtttaaggttgaagtctggt
caggtgatggaggagaactgtaagaagtatggaattcctctatatggtgcttcctttgtc
ccaaataatgcactcagatcatctgatggagaaccacagcaagaagacgaggattctggt
aatggatcaaattacgtgatttttgccggtggcggtggtgaaggtcgaagtggcatccct
aatgccctcattatctcactcttcgattctacctccaattccctttctgatcagccggtg
gatatacttggaactgccaatgatctgccctacagaatggctgttcatcccggaggagaa
ggtgtaatatgttcgttatcgaaaagttgcagatggcttgagtgggatgcaatcaggaat
gaagatattatcaatttgagtctaaagccgtctgagaaagtgcttgaacaattggaagat
gttggacaacaattggcagttacttttagccatgatggttctttacttgcagttggtggt
gaggatggtacattgagggtgttcaagtggcctagcatggcattagttcttgatgcaccg
aaggctcatacttctgtgaagaatttagatttcagccttgatgggaaatttattgtctca
gtaggaagtggccctggtagggtctgggatatctcatcatctatggccaaagcctcttta
ccaaaagaaaatgatgaagttttcggattttgtaggttctcacaaaatagcaagaatgat
caagttctctatgtcactgcaatgcgagatcgaggaggaagtatcgtgaagtggaacacc
acaacatggaagcggataagctcaaagcacatcgtacgagacccgatttctgccttcagt
gtatcaaatgatgggaagttccttgccattggtacaatcgaaggagacattcttatcttg
aattcaagtagcatgaaggtacagactgtagttaagaaagcacatttgggacttgtaaca
gcacttacattctccgatgattcaagggcgttggcttctgcatcttttgattcaagtgca
agagtgacactaataaaggaaacaaccaaaaacggcggagtgagcgtatggatcatactc
ctcatcgtcatcttacttgcagcagctttatattacgccaaaactgaaggctttcttcta
taa

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