Cynara cardunculus var. scolymus (artichoke): 112509677
Help
Entry
112509677 CDS
T05604
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112509677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112509677
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112509677
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
U-box type E3
112509677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
ARM_LIN_C
zf-RING_UBOX
zf-Nse
Arm_2
zf-C3HC4_4
HEAT_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
112509677
NCBI-ProteinID:
XP_024970529
LinkDB
All DBs
Position
LG 3:complement(10838025..10844182)
Genome browser
AA seq
624 aa
AA seq
DB search
MADQEGGDLVSQLVDLVRKFSGLPECRNAVRVMYGNLVRRVKLLSPLFEELKDSGEQLDD
DDVQGLRSLKTALNLALQLLKSVNEGSKTFQALQIDRTCDKFRVITTQIEEALCKIQYDR
LDIPEEVLEQIILVHQQFKRAVQTESPDLQLQTDLAIVKKGKEPDLETVKRLSEKLHLTT
INDLRSESVAIHDLVISTVGDHENFLETASFLLKKINDYVMQVNPAHDSPDREKRFTRHR
SPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPN
YVLKSLIALWCDSNGIELPKSQGNSKNMKAGRTGSECDQSAIALLLEKLANGNSDEQRAA
AGELRLLAKRNTDNRICIADAGAIPLLVELLSSGDSRTQEHAVTALLNLSINEANKGIIV
SVGAIPDIVDVLKNGSMEARENAAATLFSLSVVDENKVAIGAAGAILPLIDLLQEGTPRG
KKDAATAIFNLCIYQGNKVRAVRAGIVGPLMRLVKDASDGMMDEALAILAIIASHHEGKA
AIGRAEPIPILIDVVGTGSARNRENGVSILWCVCAGDMECLQMMKEFGAEEVLKELAENG
TDRAKRKAVSVLELLHRVEPVVNL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaagaagggggtgatttggtgagtcaactcgttgacttggtcaggaaattt
tcaggtttacccgagtgcagaaacgctgtaagagttatgtacgggaatctggtgaggaga
gtgaagcttttgagccctttgtttgaggaattgaaagatagtggtgaacaactcgatgat
gatgatgttcaagggttgcggtctttgaaaactgctttgaatttggctctgcagcttctc
aaatcagtcaatgaaggaagtaaaacctttcaggcactgcaaattgatagaacctgcgac
aagtttcgtgtaataacgacacaaattgaagaagcattgtgcaaaattcaatatgataga
ctcgatatacctgaggaagttctagaacagataatacttgtgcatcaacaatttaaacga
gcggtacaaacagaatctcctgatttacagcttcagacggatttggcgattgtgaaaaag
ggaaaggaaccagacttagaaacggttaaaagactttcagaaaaactgcaccttacgact
atcaatgatctaaggagtgagtcggttgccattcatgatttggtcatatcaaccgttgga
gatcatgaaaatttcttagagactgcgtcattccttcttaagaagataaacgattacgtg
atgcaagtaaatcccgcacatgatagccccgatcgtgaaaagaggttcacgcggcatcga
tctccggttattcccgatgattttcggtgcccgatatcgcttgaattgatgaaagatccc
gtgattgtatctaccgggcagacatatgaacggtcttgtattcaaaaatggctagatgcc
ggacacaaaacctgcccaaaaactcagcagactttactacacacagcgttaacgcccaac
tacgtcttgaaaagtctaatcgctttgtggtgtgatagtaacggcatcgagctgccaaaa
tcgcaaggaaattccaaaaacatgaaagccggaagaaccggttctgaatgcgaccaatct
gcaattgccttattactcgaaaaactcgcaaacgggaactcagacgagcaacgagcagct
gctggtgagcttcgattactagcaaaaaggaacacagataatcgaatatgcattgcagac
gccggtgccattccgctcttagtcgaattactatcttccggtgatagccgaactcaagag
catgccgtcaccgcacttttgaacttatcgataaacgaagcgaataaaggcattatcgtg
agcgttggagccatacccgatatcgtagatgtcttgaaaaatggaagcatggaggctcga
gaaaatgcggccgccacccttttcagcttgtcggtggtggacgaaaacaaagtggcgatc
ggtgctgccggtgccatactgccactgatcgatttgctacaagaaggtacaccaagaggg
aaaaaggacgcggccaccgccatctttaacctttgtatttatcaagggaacaaggttcga
gcggttcgtgcaggaatcgtgggtccattgatgagattggttaaagatgctagtgacgga
atgatggacgaggctttagcgattctggcgataattgcgagccaccatgaagggaaggcg
gcaatcggcagagcggagccgattccgattttgatcgatgtggtggggacgggatcggca
cggaatcgggagaacggagtgtcgattttgtggtgtgtgtgtgcgggtgacatggagtgt
ttgcagatgatgaaggagtttggagcagaggaggtgttgaaggaattggcggagaatgga
acggatagagccaagaggaaagctgtaagcgtgttggaacttctgcaccgagtcgaacca
gtggttaacctataa
DBGET
integrated database retrieval system
