Cynara cardunculus var. scolymus (artichoke): 112509718
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Entry
112509718 CDS
T05604
Name
(RefSeq) exportin-T
KO
K14288
exportin-T
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112509718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112509718
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112509718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
UTP20
Motif
Other DBs
NCBI-GeneID:
112509718
NCBI-ProteinID:
XP_024970588
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All DBs
Position
LG_3
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AA seq
988 aa
AA seq
DB search
MDDLEKAILIIFDESGTVTSELKSQAIAFCQQIKDNPSICSICIDRLCFSKLVQVQFWCL
QCLHEVLRGRYSGMSSDEKSFVRTSVFSMACYESLDNSNSVKVLDGPSYVKNKLAQVLVT
LIYFEYPSIWSSIFLDFLPNLSKGGVVIDMFSRVLNALDDELISQDYPRTVEEGAISGKI
KDAMRQQCVGQIVRAWYDILSLYRNSDSELCAFVLDTMRRYISWIEIGLIANNTFLPLLF
ELILVDGLPDQLRSSASGCVLAVVSKRMDSQAKLTLLQSLQMSRVFGLVAGDGDSEFVLG
IASLLTGYASEILDCLKNLNGDLKRASVELLNEVLPSVFYVMQNCELDTTFSIVQFLSGY
VATMKGPSPLTEAQLFHVGQILEVIRMHIRFDPMYRDNLDVLDKVGSEEEDRMIEHRKDL
LVLLRNVGRVAPDVTQLFIRNSLSSAVGSSLDINVEEVEAALSLFYAFGESLSEEAMRTG
SGILRELVPMLLSTKFPCHSNRLVALVYLDTITRYMKFVLENNQYIPLVLAAFLDDRGIH
HSKVKVSRRASYLFMRVVKLLKAKLVPFIETILQSLHDTVAQFTSMDYAAKDLSGCEDGT
HIFEAIGLLIGMEDVPLEKQSEYLSSLLTPLCQQVEILLASSRVQNSEESPSKVANIQQI
IMAINALSKGFSERLVTASRPAIGLMFKQTLDVLLQILVIFPKVETLRSKVTSFIHRMVE
TLGSSVFPYLPKALEQLLAESEPKELVGFLVLINQLICKFNTSVQDILENVYPVIASRIF
GILPRDTIPSGPGSNTEEIRELQELQRTFYTFLHVVATHDLSSVFLSTKSRVYLDPMMQL
LLYTSCNHKDLVVRKACVQIFIRLIKDWCARPFGEEKVPGFQSFVIEAFATNCCLYSVLD
KSFEFRDASTLVLFGEIVLAQKVMYERFGNDFLLNFVSKGFLAAHCPQDLAEQYCQKLQG
NDMKSLKSFYQSLIENLRVQQNGSLVFR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttggagaaggcgatactcatcatcttcgatgaatcggggacagttacatcg
gaactgaaatcacaagcgattgcattctgtcaacaaatcaaagataatccatctatttgc
agtatttgtatcgatcgattgtgtttttcgaaactggttcaagttcagttttggtgtttg
caatgtttgcacgaagttttgcgtggtcgttactccggaatgagttccgatgagaaatcg
tttgtgcggacgtccgtgttctccatggcatgctatgaatcgctcgataattccaattct
gttaaggttttagatggtccttcatatgtgaagaacaaacttgctcaagtgttggtcact
ttgatctatttcgaatatccctcaatttggtcttcgatttttcttgattttttgcctaat
ttgagcaaaggtggggttgtgatcgacatgttttctcgagttttgaatgctttagatgat
gaattgattagccaagattacccacgaactgtagaagaaggtgcaatttctgggaaaatt
aaggatgcaatgagacaacaatgtgtaggtcaaatagttcgagcttggtacgatatcttg
tcgttatatcggaattcggattccgaattatgtgcatttgttttagatacaatgaggaga
tacatttcgtggatcgaaatcggtttaattgcaaacaatactttccttcctttgttgttc
gaactgattttggtcgatggattaccggatcagcttcgaagttctgcttccggttgtgtt
cttgctgttgtttctaagcgaatggattcacaagctaagcttactcttttgcagagcctt
caaatgagtcgggttttcggtttggtggcaggtgatggtgattccgagtttgtattaggg
atagcatctttacttacagggtatgcgtctgaaattcttgattgtttgaagaatttgaat
ggtgatcttaaacgggcttcggttgagcttttaaatgaagttttgccatcggttttctac
gtaatgcagaactgtgaactcgatactacgttcagtatcgttcagtttctttccggatat
gttgccaccatgaaaggcccgtctccactgacggaagctcaactttttcatgttgggcag
atattggaggtgattcgtatgcacattcggttcgatcccatgtatcgtgataatcttgat
gtgttagataaagtagggagtgaagaggaagatcgaatgatcgagcatcggaaagatctt
cttgttttgcttcgaaatgtaggccgtgtagcacccgatgtcacccaattattcataaga
aactcactttcgagtgccgtggggtcttcgctcgatataaacgttgaagaagtcgaggct
gctctttcgcttttttatgcatttggggaatcgctaagcgaagaggctatgagaaccgga
agtggaatcttgagagaacttgtgccgatgcttttatcgaccaaattcccttgccattca
aatcggcttgttgcactcgtttatcttgatacaatcacgagatacatgaagtttgttctc
gaaaacaaccaatatattccattagttttagccgcgtttcttgatgatcgtgggattcac
cattcaaaggtgaaagttagccgaagagcgagttatcttttcatgagggttgtgaaactt
ctcaaagccaaactcgtgccttttatcgaaacaattttgcagagtctgcacgacacggtt
gcacaattcacgagtatggattatgcggccaaagatctttcaggatgcgaagatgggact
cacatttttgaggcgatcgggttgttaattggaatggaagatgtgccgcttgaaaagcaa
tcagagtacctttcgtctctgcttactcctctttgtcaacaggttgagatattgctcgcg
agttctagagttcagaactcggaagaatcaccatcaaaagttgcgaatatccaacaaatt
atcatggccataaacgcactaagcaagggatttagtgagcgtcttgtgaccgctagtcgt
cctgccattggcctcatgttcaagcagacgttggacgtgcttctacaaatccttgtgata
tttccaaaagtggaaacgttgcgctctaaggttacttcatttattcaccggatggtggag
acattaggatcatcggtatttccttaccttccaaaggcattggagcagttgcttgctgaa
agtgagccgaaggaacttgtggggtttcttgtattaatcaatcagctcatatgcaaattc
aatacttctgtccaagatattttggagaatgtataccctgttattgcaagtaggatattt
ggtattctgccaagggatacaattccatcggggccgggcagcaacaccgaggaaattcgt
gaattgcaagagcttcaacggacgttctacactttccttcatgtggtggcaacacatgat
ctgtcgtcggtgttcctttctactaaaagtcgagtctacttggatccaatgatgcagtta
ttgttgtatacttcctgtaatcacaaggatctcgttgttaggaaggcttgtgtacaaata
tttatcagattgattaaagattggtgcgcgaggccttttggcgaagaaaaggtgcccggt
tttcaaagttttgttatcgaggcttttgcaacaaactgttgtttgtacagcgtgcttgat
aagtcgttcgagttccgtgatgcaagtactcttgttttatttggggaaatagtgttagct
cagaaggtgatgtatgagagatttgggaatgattttctcctgaattttgtatcaaaaggt
tttcttgctgcacattgccctcaagatttagcagagcagtactgtcagaaactgcagggc
aatgatatgaagtcactgaagtcattctaccaatctcttatcgagaatttaagagtacaa
cagaacggaagccttgttttcagatag
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