KEGG   Cynara cardunculus var. scolymus (artichoke): 112509752
Entry
112509752         CDS       T05604                                 
Name
(RefSeq) ras-related protein RHN1
  KO
K07889  Ras-related protein Rab-5C
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112509752
   04145 Phagosome
    112509752
   04148 Efferocytosis
    112509752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112509752
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112509752
   04031 GTP-binding proteins [BR:ccav04031]
    112509752
Membrane trafficking [BR:ccav04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112509752
 Endosome - Lysosome transport
    112509752
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112509752
  Exosomal proteins of other body fluids (saliva and urine)
   112509752
  Exosomal proteins of colorectal cancer cells
   112509752
  Exosomal proteins of bladder cancer cells
   112509752
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112509752
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_16 AAA_24 TsaE
Other DBs
NCBI-GeneID: 112509752
NCBI-ProteinID: XP_024970642
LinkDB
Position
LG 1:complement(17992710..18008750)
AA seq 200 aa
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEEKRKVTAEEARAYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPNQNP
SGMVLVDRPAEGARAASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgacgatcggacacaataatctcaatgcaaaattggttttgcttggagacatggga
gctggcaaatcaagtctcgtgttgcgattcgtcaaaggccaatttctagaattccaggaa
tcgacgatcggagcggcgtttttttctcaaaccctagcagtgaatgatgcgacggtgaaa
ttcgagatctgggatacggcaggtcaagaaaggtatcatagtttggctcctatgtactac
aggggcgctgcagcagcaattattgtctacgacatcaccagcgcggattcttttacacgg
gctaaaaagtgggtgcaagaactacaaaaacaaggtaatcctaatatggttatggcactt
gctggcaacaaagctgatctggaagagaagaggaaagtgacagcagaagaggcacgtgcc
tatgccgaggagaatggtcttttcttcatggagacatccgctaaaactgctgccaatgtt
aatgatgtatttcatgaaatagccaagagactgcctagagctcagccaaatcaaaatcca
tcggggatggttcttgttgacagacctgcagaaggagctcgtgctgcatcatgctgttca
taa

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