Cynara cardunculus var. scolymus (artichoke): 112509761
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Entry
112509761 CDS
T05604
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112509761
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Gene cluster
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Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
112509761
NCBI-ProteinID:
XP_024970649
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Position
LG_3
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AA seq
685 aa
AA seq
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MRSRRKPPCAARRIIFLLCSLLLSTTVTARPFVLVLSQDDLKDGPVDDSTDDPSSIADWD
EFGESDARSDDELDPGSWRLIFEPDESISHLDVVINPELEEYYSSVRKMVAAVSDGGSAM
EDAASEIEATAATGNPHAQSLLGFLYNMGMARERNGAKAFMYHHFAADSGNMQSKLALAY
TYSRQDVYDKAVTLYAELAEAAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEEDE
DFQILEYQAQKGNAVAMYKIGIFYYFGLRGVRRDHVKALSWFTKAVDKGEPRSMELLGEI
YARGAGVQRNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVEQKNYTKAKEYFEKAAD
NEEAGGHYNLGVMHLKGIGVKKDVKLACKYFIVAANAGQPKAFYQLAKMFHTGIGLKKNL
PMATSLYKLVAERGPWNSLSRWALESYLKGEVGKAFLLYSRMAELGYEVAQSNAAWILDK
FGEASMCMGESGLCTDAERHQRAHTLWWQASEQGNEHAALLIGDAYYYGRGTERDYDRAA
DAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDAAAKLPVMLALASL
WVRRNYANSFLVDLIDSLPGVYPKVEEWIKNVVMEEGNATILTLFVCLLTVLYLRERQRR
QAAVAAGGLVPQPQPNDNNGVPAIN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcgtcggaagccaccttgcgccgcccgccggataatattcctactctgttct
cttcttctatcgacaaccgtaactgctcgccccttcgttctcgtcctatctcaagacgac
ctcaaggacggacccgttgatgactccaccgatgatccatcttccatcgccgattgggac
gagttcggcgaatcggacgctaggtccgacgatgagcttgatcctggatcctggcgcctt
atattcgagcctgatgaatcaatttctcacttggatgttgttatcaatcccgaactagag
gagtactactcaagcgttaggaagatggttgctgccgtgagcgatggcggtagcgcaatg
gaggatgccgcttcggagattgaagcgaccgccgccaccggtaatcctcacgcgcagtcg
ctgttagggtttttgtataatatgggaatggcgagggagcgtaatggtgccaaggctttc
atgtatcatcattttgccgctgactcgggcaatatgcaatccaagttggcactcgcgtat
acgtattctcgccaagatgtatatgataaagcagttacgttgtacgcagaactagctgaa
gccgctgttaatagttttttaatttcaaaagactccccggtgattgaaccagttagaatc
cataatggagcagaggaaaacaaagaggctctcaggaaatccagaggggaggaggatgag
gacttccagatcttggaataccaggcacagaaaggaaatgctgtagccatgtataagatt
gggatattttactacttcggattaagaggagttaggcgtgatcatgtcaaggcattgtca
tggtttacgaaggctgtggacaagggtgaacctaggtctatggagcttcttggagagatc
tatgcaagaggtgctggagtccagcgtaactacacaaaggctcttgaatggcttactcta
gcatccaaacaacaactttattcagcttataatgggatgggatatttatatgtcaagggt
tatggagtagaacagaagaactataccaaagcgaaagaatactttgagaaggctgctgat
aacgaggaagctggtggccattacaatttgggtgtaatgcatcttaaaggaattggggtg
aagaaagatgtgaagctagcttgtaaatatttcatagtagcagctaatgcaggtcaacca
aaagcattttaccagttggcgaagatgttccacactggcatagggctaaaaaagaatctt
ccaatggcaacatcgttgtacaaactagtggcagaaagaggaccgtggaattccttgtct
agatgggcgttagaatcatacctaaaaggtgaagtgggaaaggcattcctattatactct
cggatggccgagttaggatacgaggtggcacaaagtaatgccgcctggattcttgataag
tttggagaagcgagcatgtgcatgggagaatcagggttatgcacagatgcagaaaggcat
cagcgtgcacatacgttatggtggcaagcttctgagcagggtaatgaacatgctgctttg
ctaattggggatgcatactactatggccggggtactgaacgagattatgatcgtgcagca
gatgcttacatgcatgcaaaatcccaatcaaatgctcaagccatgtttaatttgggatac
atgcatgagcatggtcaaggacttcctttggatctccatcttgccaagcgttactatgat
caagctctagaaattgatgctgctgcaaaattgcctgtaatgctggccctcgctagcttg
tgggtacggagaaactatgcaaatagttttctggttgatttaatagattctttgcctggt
gtttacccaaaagtggaagaatggatcaagaatgtggtaatggaggaaggaaatgcaacc
attctcacccttttcgtctgcctcttgaccgttctttaccttcgtgagcggcagcggcgg
caagcggcggtggcagcgggcggattagttcctcaacctcagcctaacgacaacaatggc
gtacccgccattaattaa
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