Cynara cardunculus var. scolymus (artichoke): 112509811
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Entry
112509811 CDS
T05604
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112509811
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
112509811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
nSTAND3
AAA_14
NPHP3_N
ATPase_2
Viral_helicase1
TIP49
Cytidylate_kin
AAA_28
AAA_30
RNA_helicase
TsaE
NACHT
DUF815
RuvB_N
AAA_2
AAA_5
ABC_tran
AAA_17
AAA_11
AAA_33
KAP_NTPase
AAA_24
Rad17
bpMoxR
IstB_IS21
AAA_7
NB-ARC
SLFN-g3_helicase
nSTAND1
PduV-EutP
AAA_19
SRPRB
AAA_3
Mg_chelatase
nSTAND6
ResIII
Cytidylate_kin2
CPT
NTPase_1
Motif
Other DBs
NCBI-GeneID:
112509811
NCBI-ProteinID:
XP_024970749
LinkDB
All DBs
Position
LG 3:34321699..34332391
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AA seq
460 aa
AA seq
DB search
MSVPMEISVQNVTNGGISHDQTGIVPEPGVASSPAPTMAEDKFLVSVEVSLKPSSTARIE
DVKLAVERMLEKRSLSYVDGPIDIPLSDTFLVDNVQRICICDTEEWVGNHDILLFWQVKP
LVHVFQLSEEGPSEDLDGDSQLSSFSEWALPAKEFDGMWESLIYESGLKQRLLRYAASAL
LFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPHCQLVEVNAHSL
FSKWFSESGKLVAKLFQKIQDMVEEENNLIFVLIDEVESLAAARKAALSGSEPSDSIRVV
NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQE
LLRAGILSSSQDGDHVILLSYAGLKDKLASATTENSQSHWDISKYLLEAAEACEGLSGRS
LRKLPFLTHAALVDSKCHDPTKFLRTMINTISRERSEIPE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttccaatggagatctcggttcaaaatgttaccaatggaggcatctctcacgac
cagaccggcattgtccctgagcctggagtggcttcttcgccggcaccgactatggccgaa
gacaagttccttgtttcagttgaagttagcttgaagccttctagcacagctcgaattgag
gacgtgaaattagctgtcgaaagaatgctggaaaagaggagtttaagctatgtcgatggt
ccaattgatattccactcagtgacacctttctcgtagataatgtgcaaagaatatgtatt
tgtgacacagaggaatgggtggggaaccatgatattttgttgttttggcaagtcaagcct
cttgtgcatgtctttcagcttagtgaagagggacctagtgaagatttagatggggatagc
caactttccagctttagtgaatgggctcttcctgccaaggaatttgatggcatgtgggaa
agcttaatttatgaatctggtctcaagcaacgattactgagatatgcagcaagtgctttg
ttatttactgaaaagggtgttgacccttttcttgtatcatggaaccgtatcattcttcta
catggtcctccaggaacaggcaagacatcattatgcaaagcgttggcacagaaactgtca
atacgttttagctctagatatccacattgtcagttggtggaagttaatgcacattcattg
ttcagtaaatggttttctgaaagtggcaaattggttgccaaactttttcagaaaattcaa
gacatggtggaggaggagaacaatctgatatttgttctgattgatgaagttgaaagccta
gctgcagcaagaaaagctgctttatctggctcagaaccttcagattctataagggtggta
aatgctctactgactcagatggacaaattgaagtcttcaccaaatgtgatcattctgact
acatccaacataacagctgctattgatattgcatttgttgatcgagcggatataaaagca
tatgtgggtcctcctactctacaagcacgttatgagatactaagatcatgcttgcaagag
cttttacgagccggaatcttgtccagttctcaggatggcgatcacgtgattcttctgagt
tatgctggtttgaaagacaaattggcttcagcaacgacagaaaactctcaatcccactgg
gacataagcaagtatttgcttgaagctgccgaagcatgtgagggattgagtggaagatcg
ttaaggaaactcccgttcttgactcatgcagcacttgttgactctaaatgtcacgatccc
accaagttcttgcgcacaatgatcaacacgatcagtagggaacgctcagagatacccgaa
taa
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