Cynara cardunculus var. scolymus (artichoke): 112509847
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Entry
112509847 CDS
T05604
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00510
N-Glycan biosynthesis
ccav00513
Various types of N-glycan biosynthesis
ccav01100
Metabolic pathways
ccav04141
Protein processing in endoplasmic reticulum
Module
ccav_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112509847
00513 Various types of N-glycan biosynthesis
112509847
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112509847
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Motif
Pfam:
Ribophorin_I
Motif
Other DBs
NCBI-GeneID:
112509847
NCBI-ProteinID:
XP_024970805
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Position
LG 3:3479200..3484798
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AA seq
611 aa
AA seq
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MGRFRFDLLILLLAIHWSTALSDLVISKLDRRIDLTSQIVRMSLSLKVENTGPDPVSEVS
LTFPEYQAKNLALLMAISTEGKGKTKGFSSNLPIKVKQPDDSPPSLIWYAVSLLKGLGKG
ESLTLEVLAVFTHTLRPFPEKITQAEAQLFVFQDSAHFPVPYNVKIQSLTVKLPSENVES
YTKLENTKLSGSEIKYGPYENLPALSYSPLAIHFPSNKPFAVSQELVREIEISHWGNVQV
TEHYNLIHGGAQSTGEFSRLDYQARPNVRGASAFRNLIAMLPPRAHSIYYRDAIGNISTS
NIYGDSSKTLLEIEPRYPMFGGWKTSFTIGYGLPLRDFLFQSGGSRFLNISFGSPMNDVL
VENLTLKVVLPEGSKDIYVSIPFSAKQSRETKFSHLDIAGRPTVVIEKVNVVPEHNQYFQ
VYYKFSNLSLLTEPLMLIFGFFSLFVACIVYMHADFTISKTSASYLAKLQWDEVQATIQQ
LHDIINHCLAIHDKLEASLRELSRTGDVQACKAVRKSADSLLKDLSKDLKPLLAFLQSSP
QAAHILPKVEELVVKERDLQEKIMLKHTTVVDSYEKKSGGRDIENRVASIQQKITALKQE
VDDLLEFVEDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggtagatttcgatttgatctactcatcttattactcgccatacattggtccactgcg
ctttccgatctggtcatctccaaacttgatcgacggattgatcttacttcacagattgtg
cggatgagtttgagcttaaaggttgaaaataccggtcctgatccagtttcagaggtatct
ttgacctttccagaataccaagcaaaaaatttggcgctgttaatggctattagtactgaa
gggaaagggaaaacgaaaggtttctctagcaatcttcctatcaaagttaagcaacctgat
gattcaccaccatcactaatttggtatgctgtatctctgcttaagggactgggtaaggga
gaaagtttgaccttggaggttttggcggtattcactcatacattgcgaccatttcccgag
aaaattactcaggctgaagctcagctcttcgtgttccaggatagtgcacattttcccgta
ccttataatgttaaaatccagtcactgactgttaaactgccgagtgaaaatgtagaatct
tatacaaaacttgaaaataccaagttatctggctcagagatcaagtatggtccttatgag
aatcttcctgctctttcatactctccgctagctattcactttccaagtaataagccattt
gcagtctcgcaagaattggtgcgcgaaatagagatctcgcattggggcaatgtacaggtg
accgagcattataaccttatccatggtggtgctcaaagcacgggtgaattttcaaggctg
gactaccaggctagaccgaatgtgcgaggtgcatcagcttttaggaatcttattgccatg
ttaccaccaagagcccattcgatatactacagggatgcaattggcaatatttcaacatct
aatatatatggtgattcaagcaagacactactggaaattgaacctcgatatcctatgttt
ggtggttggaagacttcattcaccatcggatatggtttgccacttcgagacttcttgttt
caatcagggggatcccgcttccttaatatttcatttggttcacccatgaatgatgtgctc
gttgaaaaccttactttgaaggttgttttaccagagggatcaaaagatatatatgtttca
attccattctctgcaaaacagtcacgagagacaaagttttcccatttggatattgctggt
agacccacagttgtaatagaaaaggttaatgttgtcccagagcataaccagtatttccag
gtctactacaagttcagcaacctttcattgcttacggaacctttgatgttgatatttggc
tttttctccctatttgttgcttgcatcgtgtatatgcatgccgactttaccatctcaaag
acttctgcttcttatttggcaaaacttcaatgggatgaggtgcaggcaactattcagcaa
ctccacgatatcattaatcattgtctagcgatccatgacaaactagaagcttcattaaga
gaactttctagaacaggagatgtccaagcttgtaaagcagtccgcaaatcagccgacagt
ttgttgaaggacctttccaaagacttaaagccccttttggctttcttacaatcttctcca
caagctgcacatatattacccaaggtggaggagttggttgtaaaggagagagatctgcaa
gaaaagattatgctaaaacacacaacagtggtggactcttatgagaaaaaatccgggggg
cgggatatcgagaaccgtgtggcttcaatccagcagaaaatcacagctttgaagcaggaa
gttgatgatcttcttgagtttgtcgaagatatttaa
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