Cynara cardunculus var. scolymus (artichoke): 112509880
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Entry
112509880 CDS
T05604
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00531
Glycosaminoglycan degradation
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112509880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccav00536
]
112509880
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112509880
Glycosaminoglycan binding proteins [BR:
ccav00536
]
Heparan sulfate / Heparin
Enzymes
112509880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112509880
NCBI-ProteinID:
XP_024970844
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All DBs
Position
LG_3
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AA seq
542 aa
AA seq
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MKFYIALFLFLASISGVLPQNVEEAYLVINGTLPVAHTDANYICATIDWWPTNKCDYQQC
PWGSSSALNLDLSHPFLAKAIQAFERLRIRVGGSLQDQVLYSVGGFLGPCHPFFKMKGGL
FGFSKGCLHMSRWDELNQFFIRTRALVTFGLNALHGRHQIKKGVWGGDWNSSNARDFIKY
TVSKGYQIDSWEFGNELSGKGVGAMVEAEQYGNDLLELRGIIDNTYRQFRPKPLLVAPGG
FFDKQWFAELLKVSGSEIVNVMTHHMYNLGPGVDPNLVKKILDPRFLSRASVTFNDLQQT
IQTDGPWASAWIGESGGAYNSGGRHVSDTFVNSFWYLDQLAMAAKYHTKVYCRQTLIGGN
YGLLNKTTFMPNPDYYSALLWHRLMGTGVLDVDRRNIGPHLRTYAHCSKGKTGITLLLIN
LSNQTHFKLGVHNILNMNLRTTQHETSKKKTSLVHGLKTTVSWVGSKSTDEELSREEYHL
TPQHGYIRSKTMLLNGVPLELTKNGDVPSFRPAMVKLNTPISIAPLSIKFLQFPNFDAPG
CT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttacatcgccttatttctgttcctagcatcaatttctggagttttgccacaa
aatgtcgaagaggcatatcttgtgattaatgggactttacctgtggctcatacggatgca
aattatatttgtgctactattgattggtggccaactaataagtgtgactaccaacaatgt
ccatggggatcttcatctgctttaaatctggatttgtctcatccttttctagccaaagcg
attcaagcttttgaacgtttgagaatacgagttggaggttccttacaagaccaagtattg
tacagcgtaggtggtttcttgggtccttgccacccgttcttcaaaatgaaaggggggctg
tttgggttctcgaagggatgtcttcatatgagtaggtgggatgaattgaaccaattcttc
attagaacaagagcacttgtgacatttggcttgaatgcactccacgggagacaccagatt
aaaaagggagtttggggaggagattggaattctagcaatgcccgtgatttcataaagtat
acggtttccaagggatatcagatagactcatgggaatttggtaacgagttaagtggcaag
ggggttggtgcaatggtggaagccgagcagtatgggaatgatttgcttgaacttagggga
ataattgacaatacatacaggcaattccggccaaaaccattactcgtagcaccaggaggg
ttctttgacaaacagtggtttgctgagcttcttaaagtttcaggttccgagattgtcaat
gtcatgacacaccatatgtacaatctaggcccaggtgttgatccaaatttggtgaaaaag
attttagatccacgtttcttgagtcgggcatctgtcacatttaatgatcttcaacaaacc
attcaaactgatggcccctgggcatctgcttggatcggagaatctggtggggcatacaac
agtggcggccgtcatgtttcagacacttttgtaaatagcttctggtatttggatcagctt
gcaatggcagctaagtatcacacgaaagtttattgccgacaaacattaattggaggaaat
tacggtctcctcaacaaaactacattcatgcctaaccctgattactacagtgcgcttctt
tggcatcggcttatgggtactggagttcttgacgttgacagaagaaacatcggaccacat
ttgcggacttatgcccattgctcaaaagggaaaacgggtataactttgcttctgatcaac
ctaagcaaccagactcatttcaaactcggtgttcacaacattctgaacatgaatctgcgt
acaactcaacacgaaacctcgaaaaagaaaacatcactcgtccatggtctcaaaacaaca
gtctcgtgggtcggatcgaaatctacggatgaagagttgtcacgagaggagtaccactta
acgcctcaacatggatatatccggagtaaaacgatgcttttaaatggtgttccattggag
ctaaccaagaacggagacgtcccaagtttcagacctgccatggtgaagctgaacactccg
atctctatcgctcctttatccatcaagttcttgcagtttccgaactttgatgcgccgggt
tgtacatga
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