Cynara cardunculus var. scolymus (artichoke): 112509921
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Entry
112509921 CDS
T05604
Symbol
LOC112509921
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440
Homologous recombination
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112509921 (LOC112509921)
03460 Fanconi anemia pathway
112509921 (LOC112509921)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112509921 (LOC112509921)
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112509921 (LOC112509921)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
UBA_9
UBA
Motif
Other DBs
NCBI-GeneID:
112509921
NCBI-ProteinID:
XP_024970898
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All DBs
Position
LG_3:complement(2111943..2124377)
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AA seq
657 aa
AA seq
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MDRVVCSENVELVEFMLKKQKEMEDTPKGISESNAMTLLKASKNVCSSKTPIKTLKDFSK
VKGVGKWILRLMKDFFNTDSDAAENEGMIQRGGRNKGNTQYVPQKNSVAYALLITLYRGI
ANGNDFMRKQELIDAAEASGLSRSPIMPTAGKGKPGQFGVSSDRDWYSGWSCMKKLIDKG
LAVKSSCPAKYMLTEQGKEAARDCLLRSGLVDPVEDLTTGDKTLDLNLHNMKDPVCTHAR
SVEDVTSQHTSSSCQKKSVEIPPDTLNKLVCMGYSKEQVIRAFSEVAEKSPYEDTSSLWL
SVLCRLREVEVYSSPLDSENILEESSSSFTRKDGLADPFRSETGVANLASAWRSEIPKPS
LKACSSTDQDVHKRGRDNLEAKLNVLSMPPLMFGERFVDIYEVVLILDDREKFTKESRSR
NLLENLRKHLKIPIEVRRLPVGDGIWIARHKHLGSEYVLDFIVERKNVNDLRSSIRDNRY
KEQKVRILRSGLKRLIYLVEGNPNTCEGAESIKTACMTTEILEGFDVQRTNDLVDTLHKY
GHLTRSIIEYYKSLGNEAQNQDFPVCPPFDQFIKRCQELDQMTVSDVFAIQLMQVPQVTE
DVAIAVLDLYPTVLSLSRAYSNLDGDISAQEELLKKQSKNVISGVASRNIFQFIWGA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatagagtagtgtgctccgaaaatgtggagcttgtggagttcatgttgaaaaagcaa
aaggaaatggaggatacacccaaaggaatttcagagagcaacgctatgacgttattgaag
gcctccaagaacgtatgcagttccaagaccccaatcaaaaccctcaaggacttctccaaa
gtcaaaggtgttggaaagtggattttgagactcatgaaagatttctttaatactgattct
gatgctgctgagaatgaagggatgatacaaaggggtgggagaaataagggaaacacgcaa
tatgtgcctcagaagaactctgtggcgtatgctttattgatcactctttacaggggaatt
gctaatggaaacgattttatgcgaaaacaagagctaattgacgctgctgaagcaagtggc
ctgtctcgctcacctataatgcctacagcaggaaaagggaaaccgggtcagtttggagtt
agttcagacagggattggtacagcggatggagttgcatgaaaaagttgatagacaaaggg
ctggctgtaaaatcaagctgccctgcaaagtacatgctgactgagcaaggaaaagaagct
gcacgcgattgtctgttgagatctggattggttgatcctgtagaggatcttactactggg
gataaaactttggatttaaacctgcacaacatgaaagatccagtgtgcactcatgctagg
tcggtggaagatgtgacatctcagcatacatcttcaagttgtcagaaaaaatcagtcgag
attcctcctgatactcttaataagctggtgtgcatggggtactccaaagaacaagttatc
cgtgctttttctgaggttgcagaaaagtcaccatacgaggacacatcttcactttggcta
tctgttttatgtcgtcttcgggaagttgaagtttacagttcacctttggactctgagaac
attctggaagaatcatcaagttctttcactcgtaaagatggactagcggatccttttaga
agtgaaacaggtgtggcgaatttagcttctgcatggagatctgaaatcccaaagccttcc
ttgaaagcttgctcatcaactgaccaggatgtgcataaacgaggtagggataatctagaa
gctaaattgaatgttttatcaatgccacctttgatgtttggagagcggttcgtggatata
tatgaagtggttctaatattggatgatcgggagaagttcactaaggagtcaaggtctaga
aatcttcttgagaatctccgaaaacatttaaaaataccaattgaggtccgacgcttaccc
gttggagatggtatttggatagctcgccataagcatcttggtagtgaatacgttcttgat
tttatcgttgagaggaagaatgttaatgaccttcggtcttccatcagggacaaccgttac
aaagagcagaaagtgcgaatcctgaggtctggactcaaaaggctgatatacctagtagaa
ggtaatcccaatacttgcgaaggtgctgaaagtattaaaacagcttgtatgacaaccgag
attctggaggggtttgatgtgcagagaacaaatgacttagtagacacactacacaaatac
gggcatcttactcgatcaataatagaatactacaaatctcttggcaatgaagcccaaaat
caagatttcccagtctgccctcctttcgatcaatttatcaagaggtgccaagagttggat
cagatgacagtgagtgatgtatttgctatccagctcatgcaggttccacaggtgaccgaa
gatgttgccattgctgtcctggatttatacccaacagttctatcactttctcgtgcctac
tcgaatcttgatggtgacataagtgcacaagaggaactgttgaagaagcagagtaagaat
gtgataagtggagttgctagcagaaatattttccaattcatttggggtgcttga
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