Cynara cardunculus var. scolymus (artichoke): 112509941
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Entry
112509941 CDS
T05604
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03420
Nucleotide excision repair
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112509941
09124 Replication and repair
03420 Nucleotide excision repair
112509941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112509941
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112509941
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112509941
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112509941
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
UBA_RAD5A
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
112509941
NCBI-ProteinID:
XP_024970929
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Position
LG 3:complement(36883165..36888590)
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AA seq
378 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEEGFLVVMLSKSKNSGSGGASSAQLPSTTAPASIPTSAPDAQPQASKTSTSSSGP
ATAPPAPAPAPAPAPANSDTYGQAASSVVTSTGVEQTIQHIMDIGGGSWDKETVTRALQA
AYNNPERAIDYLYSGIPDTVEVAVPVTQLPATQAGIASATGVAPLSGGPNASPLNLFPQE
ITSGAAGGNLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLGLIQENHAE
FLQLINEPVDASEGDLFDQPDQEMPHAISVTPAEQEAIERLEAMGFDRTLVIEAFLACDR
NEELAANFLLENAGDYED
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtaaagactcttaaagggagccactttgaaattagggttcaaccttcc
gacactattatggcggtcaagaaaaatattgaagatgtacaaggaaaagataattaccca
tgtgggcagcagttattgattcacaatggcaaggttttgaaagatgaaactacattggca
gataacaaagtcacagaggaaggttttcttgttgtcatgcttagcaagagtaagaattct
ggctcaggtggagcttcatctgctcagctcccctctacgactgcaccagcttctattcct
accagtgcacctgatgcgcaaccacaagcttctaaaaccagcacttcatcatctggccca
gcaacagcacctccggctccggcacctgcacctgcacctgcacctgccaattctgataca
tatggccaagctgcttccagtgtagtcaccagtactggtgttgagcagactattcaacac
ataatggatattggtggtggcagttgggacaaggaaactgttactcgtgcccttcaagct
gcttacaacaatccagagcgagcaattgattacttgtattctggtattccagatacagta
gaagttgcagtcccagtgactcaactacctgcaactcaagctggtattgcaagtgccact
ggtgttgcaccgctatctggtggacctaatgcatctcccttgaacttgtttcctcaggaa
ataacgtcaggtgctgcaggaggcaatcttggatcccttgacttccttagaaacaaccag
cagttccaagcattacgttctatggtacaatcaaatccacaaatactacagcccatgctt
caggagctgggaaagcaaaaccctcaacttttaggactaatccaggagaatcatgccgag
tttcttcagttaatcaatgaacctgtcgatgcttctgaaggggatctatttgatcaacca
gatcaggagatgccacatgctattagtgttactccagcagaacaggaggccattgaacgg
cttgaggcaatgggttttgatagaacccttgttattgaggcgttcttagcctgtgatcgt
aatgaggaattggcagccaacttcttattggagaatgcgggtgattatgaggactaa
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integrated database retrieval system
